| closest.top | Find the closest genes. |
| cor.dist | Pearson correlational distance |
| cor.dist-method | Pearson correlational distance |
| euc | Euclidean distance |
| euc-method | Euclidean distance |
| KLD.matrix | Continuous version of Kullback-Leibler Distance (KLD) |
| KLD.matrix-method | Continuous version of Kullback-Leibler Distance (KLD) |
| KLdist.matrix | Discrete version of Kullback-Leibler Distance (KLD) |
| KLdist.matrix-method | Discrete version of Kullback-Leibler Distance (KLD) |
| man | Manhattan distance |
| man-method | Manhattan distance |
| MIdist | Mutual Information |
| MIdist-method | Mutual Information |
| mutualInfo | Mutual Information |
| mutualInfo-method | Mutual Information |
| spearman.dist | Spearman correlational distance |
| spearman.dist-method | Spearman correlational distance |
| tau.dist | Kendall's tau correlational distance |
| tau.dist-method | Kendall's tau correlational distance |