importFrom(grDevices, cm.colors, col2rgb, dev.copy2pdf,
                      dev.off, gray, heat.colors, pdf, topo.colors)
importFrom(graphics, par, rect, text)
importFrom(stats, cmdscale, dist, dmultinom, pbeta, pbinom)

import(gdata)

import(multtest, scatterplot3d)
importFrom(Biostrings, PhredQuality, start)
importFrom(pwalign, pairwiseAlignment)

export(ClusterFind,get.AASeq,get.AlignedPositions,get.Positions,get.SingleLetterCode,nmc,Plot.Protein.Linear, get.Remapped.Order)
