Prediction of intronic splicing branchpoints

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Documentation for package ‘branchpointer’ version 1.34.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

gtfToExons	Convert GTF file to exon location file
makeBranchpointWindowForExons	Make branchpoint window regions
makeBranchpointWindowForSNP	Makes a branchpointer formatted GRanges object from refsnp ids
plotBranchpointWindow	Plots branchpointer predictions
predictBranchpoints	Predict branchpoint probability scores
predictionsToSummary	Convert SNP branchpoint predictions across the branchpoint window to an intronic summary
readQueryFile	Read a query file