| annotate_foci_counting | annotate_foci_counting |
| annotate_foci_counting_adjusted | annotate_foci_counting_adjusted |
| append_data_frame | append_data_frame |
| auto_crop_fast | auto_crop_fast |
| count_foci | count_foci |
| crop_single_object_fast | crop_single_object_fast |
| get_blobs | get_blobs |
| get_C1 | get_C1 |
| get_coincident_foci | get_coincident_foci |
| get_foci_per_cell | get_foci_per_cell |
| get_overlap_mask | get_overlap_mask |
| get_pachytene | get_pachytene |
| keep_cells | keep_cells |
| make_foci_mask | make_foci_mask |
| make_strand_mask | make_strand_mask |
| remove_XY | remove_XY |