| add_count | Count the observations in each group |
| add_count.SpatialExperiment | Count the observations in each group |
| aggregate_cells | Aggregate cells |
| arrange | Order rows using column values |
| as_tibble | Coerce lists, matrices, and more to data frames |
| as_tibble.SpatialExperiment | Coerce lists, matrices, and more to data frames |
| bind_cols | Efficiently bind multiple data frames by row and column |
| bind_cols.SpatialExperiment | Efficiently bind multiple data frames by row and column |
| bind_rows | Efficiently bind multiple data frames by row and column |
| bind_rows.SpatialExperiment | Efficiently bind multiple data frames by row and column |
| count | Count the observations in each group |
| demo_brush_data | Demo brush data |
| demo_select_data | Demo select data |
| distinct | Keep distinct/unique rows |
| ellipse | Ellipse Gating Function |
| extract | Extract a character column into multiple columns using regular expression groups |
| extract.SpatialExperiment | Extract a character column into multiple columns using regular expression groups |
| filter | Keep rows that match a condition |
| filter.SpatialExperiment | Keep rows that match a condition |
| formatting | Printing tibbles |
| gate | Interactively gate cells by spatial coordinates |
| gate_interactive | Gate interactive |
| gate_programmatic | Gate spatial data with pre-recorded lasso selection coordinates |
| ggplot | Create a new 'ggplot' from a 'tidySpatialExperiment' |
| glimpse | Get a glimpse of your data |
| group_by | Group by one or more variables |
| inner_join | Mutating joins |
| inner_join.SpatialExperiment | Mutating joins |
| join_features | Extract and join information for features. |
| left_join | Mutating joins |
| left_join.SpatialExperiment | Mutating joins |
| mutate | Create, modify, and delete columns |
| mutate.SpatialExperiment | Create, modify, and delete columns |
| nest | Nest rows into a list-column of data frames |
| nest.SpatialExperiment | Nest rows into a list-column of data frames |
| pivot_longer | Pivot data from wide to long |
| plot_ly | Initiate a plotly visualization |
| plot_ly.SpatialExperiment | Initiate a plotly visualization |
| Printing tibbles | |
| print.SpatialExperiment | Printing tibbles |
| pull | Extract a single column |
| rectangle | Rectangle Gating Function |
| rename | Rename columns |
| right_join | Mutating joins |
| right_join.SpatialExperiment | Mutating joins |
| rowwise | Group input by rows |
| sample_frac | Sample n rows from a table |
| sample_frac.SpatialExperiment | Sample n rows from a table |
| sample_n | Sample n rows from a table |
| sample_n.SpatialExperiment | Sample n rows from a table |
| select | Keep or drop columns using their names and types |
| select.SpatialExperiment | Keep or drop columns using their names and types |
| separate | Separate a character column into multiple columns with a regular expression or numeric locations |
| separate.SpatialExperiment | Separate a character column into multiple columns with a regular expression or numeric locations |
| slice | Subset rows using their positions |
| slice_head | Subset rows using their positions |
| slice_max | Subset rows using their positions |
| slice_min | Subset rows using their positions |
| slice_sample | Subset rows using their positions |
| slice_tail | Subset rows using their positions |
| summarise | Summarise each group down to one row |
| summarize | Summarise each group down to one row |
| tbl_format_header | Format the header of a tibble |
| tbl_format_header.tidySpatialExperiment | Format the header of a tibble |
| unite | Unite multiple columns into one by pasting strings together |
| unite.SpatialExperiment | Unite multiple columns into one by pasting strings together |
| unnest | Unnest a list-column of data frames into rows and columns |
| unnest.tidySpatialExperiment_nested | Unnest a list-column of data frames into rows and columns |
| unnest_single_cell_experiment | Unnest a list-column of data frames into rows and columns |