Initialize the circuit from a topology file
or a data.frame
A typical topology file looks like
| Source | Target | Type |
| geneA | geneB | 2 |
| geneB | geneC | 1 |
| geneB | geneA | 2 |
Here the regulation type is specified by number - activation: 1,
inhibition: 2
sracipeCircuit(.object) <- value # S4 method for RacipeSE sracipeCircuit(.object) <- value
| .object | RacipeSE object |
|---|---|
| value | data.frame containing the circuit information |
data.frame
sracipeSimulate, sracipeKnockDown,
sracipeOverExp, sracipePlotData
#>sracipeCircuit(RacipeSet)#> Source Target Type #> 1 A A 1 #> 2 B A 2 #> 3 A B 2 #> 4 B B 1#> Warning: object 'demoCircuit' not found