| CellMixS-package | Toolbox to explore batch effects and data integration in scRNA data. |
| .cmsCell | .cmsCell |
| .defineSubspace | .defineSubspace |
| .filterKnn | .filterKnn |
| .filterLocMin | .filterLocMin |
| .ldfKnn | .ldfKnn |
| .smoothCms | .smoothCms |
| cms | cms |
| entropy | entropy |
| evalIntegration | evalIntegration |
| isi | isi |
| ldfDiff | ldfDiff |
| ldfSce | ldfSce |
| locStructure | locStructure |
| mixMetric | mixMetric |
| visCluster | visCluster |
| visGroup | visGroup |
| visHist | visHist |
| visIntegration | visIntegration |
| visMetric | visMetric |
| visOverview | visOverview |