| BuildRN | Builds the relevance correlation network |
| DART | Denoising Algorithm based on Relevance network Topology |
| dataDART | Example data for DART package |
| DoDART | Main function of DART |
| DoDARTCLQ | Improved edition of DoDART |
| EvalConsNet | Evaluates the consistency of the inferred relevance correlation network with the correlations predicted by the model pathway signature. |
| PredActScore | Computes the DART activation score of the model signature in the samples of a data set. |
| PruneNet | Prunes relevance network to allow only edges that are consistent with the predictions of the model signature |