Spatially-aware normalisation for spatial transcriptomics data

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Documentation for package ‘SpaNorm’ version 1.3.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

$-method	An S4 class to store a SpaNorm model fit
fastSizeFactors	Filter genes based on expression
fastSizeFactors-method	Filter genes based on expression
filterGenes	Filter genes based on expression
filterGenes-method	Filter genes based on expression
HumanDLPFC	Human dorsolateral prefrontal cortex (DLPFC) visium sample
plotSpatial	Plot spatial transcriptomic annotations per spot
SpaNorm	Spatially-dependent normalisation for spatial transcriptomics data
SpaNorm-method	Spatially-dependent normalisation for spatial transcriptomics data
SpaNormFit	An S4 class to store a SpaNorm model fit
SpaNormFit-class	An S4 class to store a SpaNorm model fit