TargetScore: Infer microRNA targets using microRNA-overexpression data and sequence information

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Documentation for package ‘TargetScore’ version 1.47.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

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TargetScore-package	TargetScore: Infer microRNA targets using microRNA-overexpression data and sequence information
bsxfun.se	bsxfun with single expansion (real Matlab style) (Internal function)
dot.ext	Elementwise dot product (modified dot function) (Internal function)
getTargetScores	Compute targetScore of an overexpressed human microRNA
initialization	Initialization of latent variable assignments (responsibility) of the VB-GMM (Internal function)
logmvgamma	Logarithmic multivariate Gamma function (Internal function)
logsumexp	Compute log(sum(exp(x),dim)) while avoiding numerical underflow (Internal function)
sort_components	Sort mixture components in increasing order of averaged means (Internal function)
TargetScore	TargetScore: Infer microRNA targets using microRNA-overexpression data and sequence information
targetScore	Probabilistic score of genes being the targets of an overexpressed microRNA
vbgmm	Variational Bayesian Gaussian mixture model (VB-GMM)
vbound	Variational Lower Bound Evaluation
vexp	Variational-Expectation in VB-EM (Internal function)
vmax	Variational-Maximimization in VB-EM (Internal function)