| analysis.bgx | Analyse BGX output. |
| bgx | Fully Bayesian integrated approach to the analysis of Affymetrix GeneChip data |
| plotDEDensity | Analyse BGX output. |
| plotDEHistogram | Analyse BGX output. |
| plotDiffRank | Analyse BGX output. |
| plotExpressionDensity | Analyse BGX output. |
| rankByDE | Analyse BGX output. |
| readOutput.bgx | Read in the output from a BGX run. |
| standalone.bgx | Fully Bayesian integrated approach to the analysis of Affymetrix GeneChip data |