| getAMR |
Search for aberrantly methylated regions |
| getAMR.obsolete |
[OBSOLETE] Search for aberrantly methylated regions |
| getUniverse |
Merges, filters and outputs all genomic regions of a given 'GRanges' object |
| plotAMR |
Plot aberrantly methylated regions |
| ramr.data |
Simulated Illumina HumanMethylation 450k data set with 3000 CpGs and 100 samples |
| ramr.samples |
Simulated Illumina HumanMethylation 450k data set with 3000 CpGs and 100 samples |
| ramr.tp.nonunique |
Simulated Illumina HumanMethylation 450k data set with 3000 CpGs and 100 samples |
| ramr.tp.unique |
Simulated Illumina HumanMethylation 450k data set with 3000 CpGs and 100 samples |
| simulateAMR |
Simulate a set of aberrantly methylated regions |
| simulateData |
Template-based simulation of methylation data sets |
| simulateData.obsolete |
[OBSOLETE] Template-based simulation of methylation data sets |
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