Unified Wilcoxon-Mann Whitney Test for testing differential expression in qPCR data

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Documentation for package ‘unifiedWMWqPCR’ version 1.45.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

unifiedWMWqPCR-package	Unified Wilcoxon-Mann Whitney Test for qPCR data.
as.matrix-method	S3 method as.matrix for uwmwEstimate objects.
as.matrix-method	S3 method as.matrix for uwmwRes objects.
as.matrix.uwmwEstimate	S3 method as.matrix for uwmwEstimate objects.
as.matrix.uwmwRes	S3 method as.matrix for uwmwRes objects.
coef	Extract info from uwmwRes and uwmwEstimate objects
coef-method	Extract info from uwmwRes and uwmwEstimate objects
esttype	Extract info from uwmwRes and uwmwEstimate objects
esttype-method	Extract info from uwmwRes and uwmwEstimate objects
forestplot	Making a forest plot of the results of uWMW
forestplot-method	Making a forest plot of the results of uWMW
forestplot.internal	Making a forest plot of the results of uWMW
getEstimate	Extract logor, or, odds and percentages from a uwmwRes object
getEstimate-method	Extract logor, or, odds and percentages from a uwmwRes object
getOrder	Extract info from uwmwRes and uwmwEstimate objects
getOrder-method	Extract info from uwmwRes and uwmwEstimate objects
groupinfo	Extract info from uwmwRes and uwmwEstimate objects
groupinfo-method	Extract info from uwmwRes and uwmwEstimate objects
housekeeping	Extract info from uwmwRes and uwmwEstimate objects
housekeeping-method	Extract info from uwmwRes and uwmwEstimate objects
is.unsorted	Extract info from uwmwRes and uwmwEstimate objects
is.unsorted-method	Extract info from uwmwRes and uwmwEstimate objects
length-method	Extract info from uwmwRes and uwmwEstimate objects
logor	Extract info from uwmwRes and uwmwEstimate objects
logor-method	Extract info from uwmwRes and uwmwEstimate objects
names-method	Extract info from uwmwRes and uwmwEstimate objects
NBdata	Documentation for the dataset NBdata
NBgroups	Documentation for the dataset NBdata
NBmat	Documentation for the dataset NBdata
oddsRatio	Extract info from uwmwRes and uwmwEstimate objects
oddsRatio-method	Extract info from uwmwRes and uwmwEstimate objects
order-method	Sort and order method for uWMWRes objects
orderedBy	Extract info from uwmwRes and uwmwEstimate objects
orderedBy-method	Extract info from uwmwRes and uwmwEstimate objects
plot-method	Quick forest plot of significantly up- and downregulated features.
pval	Extract info from uwmwRes and uwmwEstimate objects
pval-method	Extract info from uwmwRes and uwmwEstimate objects
ref	Extract info from uwmwRes and uwmwEstimate objects
ref-method	Extract info from uwmwRes and uwmwEstimate objects
se	Extract info from uwmwRes and uwmwEstimate objects
se-method	Extract info from uwmwRes and uwmwEstimate objects
sort	Sort and order method for uWMWRes objects
sort-method	Sort and order method for uWMWRes objects
type	Extract info from uwmwRes and uwmwEstimate objects
type-method	Extract info from uwmwRes and uwmwEstimate objects
unifiedWMWqPCR	Unified Wilcoxon-Mann Whitney Test for qPCR data.
unorder	Sort and order method for uWMWRes objects
unorder-method	Sort and order method for uWMWRes objects
uWMW	The unified Wilcoxon-Mann-Whitney test for qPCR data
uWMW-method	The unified Wilcoxon-Mann-Whitney test for qPCR data
uwmwEstimate	The class uwmwEstimate
uwmwEstimate-class	The class uwmwEstimate
uWMWqPCR	Unified Wilcoxon-Mann Whitney Test for qPCR data.
uwmwRes	Class uwmwRes
uwmwRes-class	Class uwmwRes
uwmw_Accessors	Extract info from uwmwRes and uwmwEstimate objects
uwmw_Extract	Extract data from uwmwRes and uwmwEstimate objects.
vcov	Extract info from uwmwRes and uwmwEstimate objects
vcov-method	Extract info from uwmwRes and uwmwEstimate objects
volcano-par	Parameters used for the function volcanoplot
volcanopar	Parameters used for the function volcanoplot
volcanoplot	Make a volcano plot of the outcome of a uWMW test
volcanoplot-method	Make a volcano plot of the outcome of a uWMW test
volcanoplot-par	Parameters used for the function volcanoplot
volcanoplotpar	Parameters used for the function volcanoplot
zval	Extract info from uwmwRes and uwmwEstimate objects
zval-method	Extract info from uwmwRes and uwmwEstimate objects
[-method	Extract data from uwmwRes and uwmwEstimate objects.