Well Plate Maker

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Documentation for package ‘wpm’ version 1.19.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

backtracking	Backtracking Function
balancedGrpDistrib	Makes a balanced distribution of the elements between several plates.
checkConstraints	Check for spatial constraints
checkWpmInputs	Check the inputs for the wrapper function
convertCSV	Convert a CSV File into a valid dataframe for WPM
convertESet	Convert the phenotype data of an ExpressionSet or MsnSet into a dataframe for WPM
convertSE	Convert the phenotype data of a SummarizedExperiment into a dataframe for WPM
convertVector2Df	Convert a vector of plate coordinates into a dataframe
data_test	Fictitious clinical data for demonstration.
defineBufferCoords	Determines buffer wells coordinates on a plate
drawMap	Generate a ggplot object of a plate plan
findNEWSneighbors	Find the 4 cardinal neighbors of an element of a matrix
findNSneighbors	Find the top and bottom neighbors of an element of a matrix
findWEneighbors	Find the left and right neighbors of an element of a matrix
generateMap	Generate a plate map according to the input parameters
joinDataframes	Binds multiple dataframes together
randomWalk	Random walk of the matrix to fill
resample	Randomly take a number of elements in a vector
solveCell	Affects a sample to the chosen cell in the plate
wpm	Run the Shiny Application of Well Plate Maker
wrapperWPM	Generate plate plans in a single step