counts                  Accessors for the count matrix of a
                        IsomirDataSeq object.
dat286.long             Data frame containing mirna from Argyropoulos's
                        paper
design                  Accessors for the 'design' slot of a
                        IsomirDataSeq object.
ego                     enrichResult class
gene_ex_rse             Data frame containing gene expression data
isoAnnotate             Annotate the rawData of the IsomirDataSeq
                        object
isoCounts               Create count matrix with different summarizing
                        options
isoDE                   Differential expression analysis with DESeq2
IsomirDataSeq-class     Class that contains all isomiRs annotation for
                        all samples
IsomirDataSeqFromFiles
                        Loads miRNA annotation from seqbuster tool or
                        pre-processed data.
IsomirDataSeqFromMirtop
                        Import 'mirtop' output into 'IsomirDataSeq'
IsomirDataSeqFromRawData
                        Loads miRNA annotation from seqbuster tool or
                        pre-processed data.
isomiRs-package         isomiRs
isoNorm                 Normalize count matrix
isoPlot                 Plot the amount of isomiRs in different samples
isoPlotPosition         Plot nucleotides changes at a given position
isoSelect               Method to select specific miRNAs from an
                        IsomirDataSeq object.
isoTop                  Heatmap of the top expressed isomiRs
ma_ex                   Data frame containing gene-mirna relationship
mirData                 Example of IsomirDataSeq with human brain miRNA
                        counts data
mirna_ex_rse            Data frame containing mirna expression data
mirTritation            Data frame containing mirna from Argyropoulos's
                        paper
updateIsomirDataSeq     Update IsomirDataSeq object from version < 1.7
