Package: rGADEM
Type: Package
Title: de novo motif discovery
Version: 2.58.0
Date: 2014-04-01
Author: Arnaud Droit, Raphael Gottardo, Gordon Robertson and Leiping Li
Maintainer: Arnaud Droit <arnaud.droit@crchuq.ulaval.ca>
Depends: R (>= 2.11.0), Biostrings, IRanges, BSgenome, methods, seqLogo
Imports: Biostrings, GenomicRanges, methods, graphics, seqLogo
Suggests: BSgenome.Hsapiens.UCSC.hg19, rtracklayer
Description: rGADEM is an efficient de novo motif discovery tool for
        large-scale genomic sequence data. It is an open-source R
        package, which is based on the GADEM software.
License: Artistic-2.0
biocViews: Microarray, ChIPchip, Sequencing, ChIPSeq, MotifDiscovery
PackageStatus: Deprecated
Config/pak/sysreqs: make libbz2-dev liblzma-dev libxml2-dev libssl-dev
        xz-utils zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 14:04:22 UTC
RemoteUrl: https://github.com/bioc/rGADEM
RemoteRef: RELEASE_3_22
RemoteSha: 32b26c2f8cf174d1e2c640ac59894b90448a1994
NeedsCompilation: yes
Packaged: 2026-01-04 10:46:28 UTC; root
Built: R 4.5.2; x86_64-w64-mingw32; 2026-01-04 10:49:22 UTC; windows
Archs: x64
