Package: BSgenome.Btaurus.UCSC.bosTau9.masked
Title: Full masked genome sequences for Bos taurus (UCSC version
        bosTau9)
Description: Full genome sequences for Bos taurus (Cow) as provided by UCSC (genome bosTau9) and stored in Biostrings objects. The sequences are the same as in BSgenome.Btaurus.UCSC.bosTau9, except that each of them has the 4 following masks on top: (1) the mask of assembly gaps (AGAPS mask), (2) the mask of intra-contig ambiguities (AMB mask), (3) the mask of repeats from RepeatMasker (RM mask), and (4) the mask of repeats from Tandem Repeats Finder (TRF mask). Only the AGAPS and AMB masks are "active" by default.
Version: 1.4.4
Author: The Bioconductor Dev Team
Maintainer: Bioconductor Package Maintainer <maintainer@bioconductor.org>
Depends: R (>= 3.5.0), BSgenome (>= 1.62.0),
        BSgenome.Btaurus.UCSC.bosTau9
Imports: BSgenome, BSgenome.Btaurus.UCSC.bosTau9
License: Artistic-2.0
organism: Bos taurus
common_name: Cow
provider: UCSC
genome: bosTau9
release_date: Apr. 2018
source_url: https://hgdownload.soe.ucsc.edu/goldenPath/bosTau9/bigZips/
biocViews: AnnotationData, Genetics, BSgenome, Bos_taurus
NeedsCompilation: no
Packaged: 2022-03-24 15:52:17 UTC; hpages
