Package: BSgenome.Rnorvegicus.UCSC.rn4.masked
Title: Full masked genome sequences for Rattus norvegicus (UCSC version
        rn4)
Description: Full genome sequences for Rattus norvegicus (Rat) as provided by UCSC (rn4, Nov. 2004) and stored in Biostrings objects. The sequences are the same as in BSgenome.Rnorvegicus.UCSC.rn4, except that each of them has the 4 following masks on top: (1) the mask of assembly gaps (AGAPS mask), (2) the mask of intra-contig ambiguities (AMB mask), (3) the mask of repeats from RepeatMasker (RM mask), and (4) the mask of repeats from Tandem Repeats Finder (TRF mask). Only the AGAPS and AMB masks are "active" by default.
Version: 1.3.99
Author: The Bioconductor Dev Team
Maintainer: Bioconductor Package Maintainer
        <maintainer@bioconductor.org>
Depends: BSgenome (>= 1.31.8), BSgenome.Rnorvegicus.UCSC.rn4
Imports: BSgenome, BSgenome.Rnorvegicus.UCSC.rn4
License: Artistic-2.0
organism: Rattus norvegicus
species: Rat
provider: UCSC
provider_version: rn4
release_date: Nov. 2004
release_name: Baylor College of Medicine HGSC v3.4
source_url: http://hgdownload.cse.ucsc.edu/goldenPath/rn4/bigZips/
biocViews: AnnotationData, Genetics, BSgenome, Rattus_norvegicus
Packaged: 2014-01-08 20:14:03 UTC; hpages
