MutationalSignatures    'MutationalSignatures' class and methods
SomaticSignatures       SomaticSignatures package
assessNumberSignatures
                        Number of Signatures
cluster-spectrum        Cluster Mutational Spectrum
decomposition-signatures
                        Decomposition Functions for Somatic Signatures
gcContent               GC Content
hs-chrs                 Human Chromosome Names
kmerFrequency           Kmer Frequency
kmers-data              Kmer datasets
motifMatrix             Group somatic moticfs
mutationContext         mutationContext functions
mutationDistance        Distributions of mutational locations.
mutational-normalization
                        Normalize Somatic Motifs
mutational-plots        Mutational Plots
mutational-signatures   Estimate Somatic Signatures
ncbi                    GRanges converter functions
plotObservedSpectrum    Plot Mutational Signatures
readMutect              readMutect
sca-data                SomaticCancerAlterations Results
signatures21-data       21 Signatures
variants-utils          Utility functions
