# Generated by roxygen2: do not edit by hand

export("channelNames<-")
export("setChannels<-")
export("setImages<-")
export(CytoImageList)
export(channelNames)
export(compImage)
export(cytomapperShiny)
export(getChannels)
export(getImages)
export(loadImages)
export(measureObjects)
export(mergeChannels)
export(plotCells)
export(plotPixels)
export(scaleImages)
exportClasses(CytoImageList)
exportMethods("[<-")
exportMethods("[[<-")
exportMethods("channelNames<-")
exportMethods("names<-")
exportMethods("setChannels<-")
exportMethods("setImages<-")
exportMethods(channelNames)
exportMethods(coerce)
exportMethods(getChannels)
exportMethods(getImages)
exportMethods(names)
exportMethods(normalize)
exportMethods(scaleImages)
exportMethods(show)
import(SingleCellExperiment)
import(ggplot2)
import(methods)
import(shiny)
import(shinydashboard)
importClassesFrom(DelayedArray,DelayedArray)
importClassesFrom(HDF5Array,HDF5Array)
importClassesFrom(S4Vectors,SimpleList)
importClassesFrom(SingleCellExperiment,SingleCellExperiment)
importFrom(BiocParallel,MulticoreParam)
importFrom(BiocParallel,SerialParam)
importFrom(BiocParallel,bplapply)
importFrom(BiocParallel,bpmapply)
importFrom(DelayedArray,DelayedArray)
importFrom(DelayedArray,path)
importFrom(DelayedArray,seed)
importFrom(EBImage,"imageData<-")
importFrom(EBImage,Image)
importFrom(EBImage,abind)
importFrom(EBImage,colorMode)
importFrom(EBImage,combine)
importFrom(EBImage,computeFeatures.basic)
importFrom(EBImage,computeFeatures.haralick)
importFrom(EBImage,computeFeatures.moment)
importFrom(EBImage,computeFeatures.shape)
importFrom(EBImage,imageData)
importFrom(EBImage,normalize)
importFrom(EBImage,numberOfFrames)
importFrom(EBImage,paintObjects)
importFrom(EBImage,readImage)
importFrom(HDF5Array,HDF5Array)
importFrom(HDF5Array,writeHDF5Array)
importFrom(RColorBrewer,brewer.pal)
importFrom(S4Vectors,"mcols<-")
importFrom(S4Vectors,DataFrame)
importFrom(S4Vectors,SimpleList)
importFrom(S4Vectors,endoapply)
importFrom(S4Vectors,isEmpty)
importFrom(S4Vectors,mcols)
importFrom(S4Vectors,mendoapply)
importFrom(S4Vectors,metadata)
importFrom(S4Vectors,new2)
importFrom(S4Vectors,setValidity2)
importFrom(SingleCellExperiment,int_metadata)
importFrom(SpatialExperiment,"spatialCoords<-")
importFrom(SpatialExperiment,SpatialExperiment)
importFrom(SummarizedExperiment,"assayNames<-")
importFrom(SummarizedExperiment,"colData<-")
importFrom(SummarizedExperiment,"metadata<-")
importFrom(SummarizedExperiment,assay)
importFrom(SummarizedExperiment,assayNames)
importFrom(ggbeeswarm,geom_quasirandom)
importFrom(grDevices,col2rgb)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,dev.off)
importFrom(grDevices,jpeg)
importFrom(grDevices,png)
importFrom(grDevices,recordPlot)
importFrom(grDevices,rgb)
importFrom(grDevices,tiff)
importFrom(graphics,legend)
importFrom(graphics,par)
importFrom(graphics,rasterImage)
importFrom(graphics,rect)
importFrom(graphics,strheight)
importFrom(graphics,strwidth)
importFrom(graphics,text)
importFrom(matrixStats,rowRanges)
importFrom(methods,as)
importFrom(methods,callNextMethod)
importFrom(methods,is)
importFrom(methods,validObject)
importFrom(nnls,nnls)
importFrom(raster,as.raster)
importFrom(rhdf5,h5delete)
importFrom(rhdf5,h5ls)
importFrom(stats,quantile)
importFrom(svgPanZoom,renderSvgPanZoom)
importFrom(svgPanZoom,svgPanZoom)
importFrom(svgPanZoom,svgPanZoomOutput)
importFrom(svglite,stringSVG)
importFrom(tools,file_ext)
importFrom(tools,file_path_sans_ext)
importFrom(utils,capture.output)
importFrom(utils,packageVersion)
importFrom(utils,sessionInfo)
importFrom(viridis,inferno)
importFrom(viridis,viridis)
