filter_properties       Return all supported filter properties
forget_gemma_memoised   Clear gemma.R cache
gemma_call              Custom gemma call
gemma_kable             Create printable tables out of gemma.R outputs
gemma_memoise           Enable and disable memoisation of gemma.R
                        functions
gemma.R                 gemma.R package: Access curated gene expression
                        data and differential expression analyses
get_all_pages           Get all pages of a paginated call
get_annotation_children
                        Retrieve children of a given annotation
get_annotation_parents
                        Retrieve parents of a given annotation
get_child_terms         Return child terms of a term
get_dataset_annotations
                        Retrieve the annotations of a dataset
get_dataset_differential_expression_analyses
                        Retrieve annotations and surface level stats
                        for a dataset's differential analyses
get_dataset_expression_for_genes
                        Retrieve the expression data matrix of a set of
                        datasets and genes
get_dataset_object      Compile gene expression data and metadata
get_dataset_platforms   Retrieve the platforms of a dataset
get_dataset_processed_expression
                        Retrieve processed expression data of a dataset
get_dataset_publications
                        Retrieve all publications associated with a
                        dataset
get_dataset_quantitation_types
                        Retrieve quantitation types of a dataset
get_dataset_raw_expression
                        Retrieve raw expression data of a dataset
get_dataset_samples     Retrieve the samples of a dataset
get_datasets            Retrieve all datasets
get_datasets_by_ids     Retrieve datasets by their identifiers
get_differential_expression_values
                        Retrieve differential expression results
get_gene_differential_expression_values
                        Retrieve the differential expression results
                        for a given gene among datasets matching the
                        provided query and filter
get_gene_go_terms       Retrieve the GO terms associated to a gene
get_gene_locations      Retrieve the physical locations of a given gene
get_gene_probes         Retrieve the probes associated to a genes
                        across all platforms
get_genes               Retrieve all genes
get_platform_annotations
                        Retrieve Platform Annotations by Gemma
get_platform_datasets   Retrieve all experiments using a given platform
get_platform_element_genes
                        Retrieve the genes associated to a probe in a
                        given platform
get_platforms_by_ids    Retrieve all platforms matching a set of
                        platform identifiers
get_result_sets         Retrieve all result sets matching the provided
                        criteria
get_taxa                Get taxa
make_design             Make simplified design frames
search_annotations      Search for annotation tags
search_gemma            Search everything in Gemma
set_gemma_user          Authentication by user name
update_result           Update result
visualize_dataset       Quick differential expression visualization
