c62288a874d5e862e6a625076f1f070b9ae201b124c3d7f85c35ba28f6aa5c8a 5971 DESCRIPTION
f0dab0715eb323cd13a98255c373398b568282563857669e67ebf0598f53ea7e 4512 INDEX
4cabb00406b10ab960d3ebb5c14e5042cf54d2b970cc4047588aa28c703525fe 9073 LICENSE
0863ded1e39cdffc4dedfc69781cf3cd1e9d06c47d1525f7382b62489a2286c1 4460 Meta/Rd.rds
1a019860032fbe6b81a0843ef3f3720a99c5c17dbc2fb6d4bb884dd946f7142c 500 Meta/data.rds
b4f074bc0f45cfe56d976c0d67a1453067f4b34693828ed02d674a6641b3e332 123 Meta/features.rds
b8e880e49ad286f054cadda5aa37747d4eb613f6ecdb5c662eafe2fe98aa3b1c 4411 Meta/hsearch.rds
a8ae39b572405a06601740f40769a579d69653bfb26432530a0d3b2ae4997a4d 3064 Meta/links.rds
dfb7f6a5a061f12bc44e7cbb8f85bcafcbaf3e881da1a1b20c083c42b28d1795 3380 Meta/nsInfo.rds
7fd46ff1c544b2178e5628750514d9060d301b49f74514ef4a86766f443cf26c 2961 Meta/package.rds
2077ca34d7f201daa475f7ee9a77e694baf287cebcf8f6873221fbb610de02f1 189 Meta/vignette.rds
edaa15a6bb9c4ff562f89e9eafdaeb811e1a68f43ee7b29586d789d7e78db059 14178 NAMESPACE
2b66be0e36cebcacd298e185c38442083a1ce5660aad40d035a231542bb6dc3f 10423 NEWS
570ca456b280cdeb201ef5ebdf22dc8f80092e2c0c68e33c7f73340e420f3759 1058 R/mia
6f123ecae78da2686875b5db294ceaaf969d581f00df15328cd3612d4f6f3d46 941805 R/mia.rdb
5a1ee453e746801d707f2c322c51dad262805a26bede19e67277dafb093a2c55 12980 R/mia.rdx
aa4238b235f7f0086bebd59028e8f6fd8dd1b399c0f5ff11d473e1a960b70607 2387 README.md
d1cad0994f7efcab9d7510d3dee140b7e0a0174cbec5f1233cc8fae15bd832fb 453864 data/GlobalPatterns.rda
4235bfc0ba53a42fad51dde82ade31e2d5e5f0b56991dd18294f5b0b8d0f3957 209288 data/HintikkaXOData.rda
d63cccd8fe73256e5e5bff3ad0d5ca133fbeb775912cad0d66e7b22c275405b0 10060 data/Tengeler2020.rda
06f8974e8cbc22589a369a59d149d00e6b4be174e4da59e74a1ef7886e8cb40c 189804 data/Tito2024QMP.rda
929002d1de7c14dcdb3983e8033510bcdf1dfb05dfa2861ca68da98da96fda7d 101 data/datalist
bb94ae0609555db35ae5d4ae828698c956e19ab4364f10b4dc37b7a6d227c59d 152002 data/dmn_se.rda
fba245ceadde63b6f75709887b139a1ada293edba2c371465f2a02cdd631ce03 195644 data/enterotype.rda
ef0423d26fffbfc882fcdeb95373f9bc450050f2d6a6ec4af35ccf0af24f5c04 2704 data/esophagus.rda
041c20d85aab3bd24bea7528fe0629ec8c2eb65b1c5e7b0064de3d1193b1ee1a 515036 data/ibdmdb.rda
775d6f664cfd7a7715bf873254431ec824da6a851aae5ca973f881e3520942e3 20924 data/peerj13075.rda
5c788d47e765618be4e3e024965a140dee767edbb8d604649fbf0aa98cc14063 1324 doc/index.html
e58acfaf0b47c86f0f041ef1fcb7f803b5c8a1e0bb9955551f69d356922350e4 5045 doc/mia.R
d4f4f8a597f35c8aa06380d85a88fe21169d363d4216f4833c1371146bea732e 9696 doc/mia.Rmd
04a6b44370bd381908f5e48d4133d3ecd1d4aff5fa286c35a5d1b354405cdd8d 46255 doc/mia.html
77d1a975390b668e998af4ad412276d9d0b48670a0f9f4223352f1f72b50b262 46196 extdata/Aggregated_humanization2.biom
3c53ac08c473d3edfc12bf44003a28662bf9ec2a72aefcc9cf3ea0b11cfeb5e9 4826 extdata/Data_humanization_phylo_aggregation.tre
0d0372a1d16a4ccb9b91e7a46c4e580d159a5773b4fafe9d4ba11a0205fb5651 1146 extdata/Mapping_file_ADHD_aggregated.csv
0e951323e862e53885595793d10446c0e4c884cfc4b2270908491d8761080273 39736 extdata/complete.biom
f947a0fd8a329765b433f5c7351a988294d9606ed3ecde9c3644f24ed6f4aea1 998 extdata/humann_output.tsv
7a79b41171ae2a9089412add9d358427ea5fa7eabfb7f285fd23700c07796e24 39736 extdata/less_ranks.biom
f0f096d55eb9376af28f3d060202642542af263810dd5c8a040bfeefdcb0498d 8539 extdata/merged_abundance_table.txt
50cee73030d8241e8e1d4df1755b5cef3ec10df3d4cdd2aff57cfe17bdd571d3 39736 extdata/more_ranks.biom
c40ea64cb049bf36bd3dd25e7c4741fe8e104218d346656769dc31ca05a23108 12292 extdata/mothur_example.cons.taxonomy
8890636a139ffdcd9ebce042f7d3f5fd86dac0da29cc25260ab3ef7167367bf9 1712 extdata/mothur_example.design
76865d74d2a3944f071260e4621df530264c295f5c7184257577d98e1b012ada 23188 extdata/mothur_example.shared
2ed2df1e91006721e42814276915a99de812feb1f5cc8fb9cbed90f383f00e78 11874 extdata/mothur_example.taxonomy
d8bab8531a20844f3c83629744b5ffe8837368db86954aeb2685716150eacaea 49972 extdata/refseq.qza
9dbfbedd90776d77c431faa914d81b0d6299fff10c364216dbcd5c6df5382cc9 2094 extdata/sample-metadata.tsv
dac66921213ca78d64460edfbb5ccb5e8da09f16f1f90b5ca9e1e5df87aed04f 33824 extdata/simple.biom
3b661b025cdc165c26af644a6e1cc31d38890d880b5af3081f535b65158ec0fc 32412 extdata/table-rownamesInSeq.qza
a4de59cd41261f1f5efb5fe116a64fb7fdda299f1e5af7f3788cd248022f10e4 53825 extdata/table.qza
f3b86d0718eea7ab150b6e799dd8512fdae9497a255a326dea8d118ccef23e78 91773 extdata/taxonomy.qza
e2b5ee3aa04fda732c06f3524feee7a4e5984219ccf615a99a6881d3c5831514 619231 extdata/taxpasta_no_type.biom
406fa66c4fd99b4dae06c230c120cab831e51c1bb6769f889a49db619d13e7bd 65981 extdata/tree.qza
1718d598262e5105dc8c6a78e97f6f5e30eab45ca79321b19a1ac5ee1c2b7f43 15960 help/AnIndex
a62b70b57f6964c712e924f0a3ea5060a274be19df5bbd07dbbdce0bcfa3b2d1 2954 help/aliases.rds
64c33eabeca880a2d878c8389394d7aa6d06966896d7cfd20da6598d1b4d8c82 991561 help/figures/mia_logo.png
9cd71e67b4f807fd83f44440ba5df5b0113f6f2add03cfdc08afbf524235968c 310541 help/mia.rdb
55a5b0042a361960de58fcde50f09cbaf59a3936375aec6e0440816a575faf15 1417 help/mia.rdx
60dad28c161e3128a170053b522fd405ba2133ccb4def5a3267ac30216a99890 707 help/paths.rds
c11747713c8ba975414cf9bbc0fa2ad435a99f8dbbf4bbd23af898ed10888b49 55896 html/00Index.html
3d290675266eebeba6efff07db879d699843c80bf428f9e71000e2fc6078f5db 2133 html/R.css
2da817debd66c69b5e516b3fe048dc6aad87eebc6c6bdc79ce7bc0a8b052400a 198048 libs/mia.so
247eef680feb71edec8f7895661fa741a2835572e25afd03dd3e6067338a8528 17494 libs/symbols.rds
b516f0c33b2f738798de1a9a695473f28d4083fb37e5344d935eceace3893b2a 2001 scripts/Tito2024QMP.R
9e5048cc087d5a9f6aca8464827cf3aa4131e4fad3fd11a49ce1ce46669f8305 7629 scripts/biom_test_data.py
7803dc4b7d91526307a83b899c42457efa71723a1f179f0c75165000edbb360a 1198 scripts/import.R
820e68222b855285195739f437f9de1716af64e594a66707409daa32c5079eef 9953 scripts/prepare_ibdmdb.R
