ConsensusTADs           Consensus boundary identification
DiffPlot                Visualization of differential TAD boundaries
GM12878.40kb.raw.chr2   A subset of chomosome 2 contact matrix, GM12878
                        cell line.
IMR90.40kb.raw.chr2     A subset of chomosome 2 contact matrix, IMR90
                        cell line.
TADCompare              Differential TAD boundary detection
TimeCompare             Time-varying TAD boundary analysis
rao_chr22_prim          Chromosome 22 combined intrachromosomal primary
                        contact matrix from Rao et al. 2014.
rao_chr22_rep           Chromosome 22 combined intrachromosomal
                        replicate contact matrix from Rao et al. 2014.
time_mats               Chromosome 22 time-varying contact matrices
                        from Rao et al. 2017.
