Package: pvca
Type: Package
Title: Principal Variance Component Analysis (PVCA)
Version: 1.53.0
Date: 2013-09-25
Author: Pierre Bushel <bushel@niehs.nih.gov>
Maintainer: Jianying LI <li11@niehs.nih.gov>
Description: This package contains the function to assess the batch
        sourcs by fitting all "sources" as random effects including
        two-way interaction terms in the Mixed Model(depends on lme4
        package) to selected principal components, which were obtained
        from the original data correlation matrix. This package
        accompanies the book "Batch Effects and Noise in Microarray
        Experiements, chapter 12.
Depends: R (>= 2.15.1)
Imports: Matrix, Biobase, vsn, stats, lme4
Suggests: golubEsets
License: LGPL (>= 2.0)
LazyLoad: yes
Packaged: 2026-05-18 23:05:57 UTC; biocbuild
biocViews: Microarray, BatchEffect
git_url: https://git.bioconductor.org/packages/pvca
git_branch: devel
git_last_commit: 4399c6e
git_last_commit_date: 2026-04-28
Repository: Bioconductor 3.24
Date/Publication: 2026-05-18
NeedsCompilation: no
Built: R 4.6.0; ; 2026-05-19 05:04:12 UTC; unix
