Package: MsBackendMetabolomicsWorkbench
Title: Retrieve Mass Spectrometry Data from Metabolomics Workbench
Version: 0.99.1
Authors@R: 
    c(person(given = "Gabriele", family = "Tomè",
             email = "gabriele.tome@eurac.edu",
             role = c("aut","cre"),
             comment = c(ORCID = "0000-0002-3976-6068",
             fnd = "MetaRbolomics4Galaxy project (CUP: D53C25001030003) co-funded by the Autonomous Province of Bolzano under the Joint Projects South Tyrol–Germany 2025 program.")),
      person(given = "Philippine", family = "Louail",
             email = "philippine.louail@eurac.edu",
             role = c("aut"),
             comment = c(ORCID = "0009-0007-5429-6846")),
      person(given = "Johannes", family = "Rainer",
             email = "Johannes.Rainer@eurac.edu",
             role = c("aut"),
             comment = c(ORCID = "0000-0002-6977-7147")))
Description: Metabolomics Workbench is one of the main public repositories for
    storage of metabolomics experiments. The MsBackendMetabolomicsWorkbench
    package provides functionality to retrieve and represent mass spectrometry
    (MS) data from Metabolomics Workbench. Data files are downloaded and cached
    locally avoiding repetitive downloads. MS data from metabolomics experiments
    can thus be directly and seamlessly integrated into R-based analysis
    workflows with the Spectra and MsBackendMetabolomicsWorkbench package.
Depends: R (>= 4.2.0), Spectra (>= 1.15.12)
Imports: rvest, httr2, curl, ProtGenerics, BiocFileCache, S4Vectors,
        methods, MsCoreUtils (>= 1.23.9), jsonlite, plyr, tidyr,
        archive
Suggests: testthat, rmarkdown, mzR, knitr, BiocStyle
License: GPL-3
Encoding: UTF-8
VignetteBuilder: knitr
BugReports: https://github.com/RforMassSpectrometry/MsBackendMetabolomicsWorkbench/issues
URL:
        https://github.com/RforMassSpectrometry/MsBackendMetabolomicsWorkbench
biocViews: Infrastructure, MassSpectrometry, Metabolomics, DataImport,
        Proteomics
Roxygen: list(markdown=TRUE)
Config/roxygen2/version: 8.0.0
git_url:
        https://git.bioconductor.org/packages/MsBackendMetabolomicsWorkbench
git_branch: devel
git_last_commit: 9d49c9e
git_last_commit_date: 2026-07-22
Repository: Bioconductor 3.24
Date/Publication: 2026-07-31
NeedsCompilation: no
Packaged: 2026-07-31 23:01:42 UTC; biocbuild
Author: Gabriele Tomè [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-3976-6068>, fnd: MetaRbolomics4Galaxy
    project (CUP: D53C25001030003) co-funded by the Autonomous Province
    of Bolzano under the Joint Projects South Tyrol–Germany 2025
    program.),
  Philippine Louail [aut] (ORCID:
    <https://orcid.org/0009-0007-5429-6846>),
  Johannes Rainer [aut] (ORCID: <https://orcid.org/0000-0002-6977-7147>)
Maintainer: Gabriele Tomè <gabriele.tome@eurac.edu>
