a0191f0e868567d23962a8c371f94033 *DESCRIPTION
ae6695923ffbe2a2eddcffe1aac68c64 *NAMESPACE
942009e5338ca07e5a76f4b2475a9ac1 *NEWS.md
ff1b41d8e834e1a29d0092d0ee8d4b5c *R/IS.R
c9e220b25f0b610905d9e4412a4a24d8 *R/RBPSpecificity-package.R
3caea67765b0a2b8fe7edc04ae157a45 *R/VS.R
d8625bc23d17ecebeea34fbd8e17ab99 *R/enrichment.R
b686df1ee38fb0545af386a95bf283ae *R/plotter.R
2b5be507c19a15f08720e1f78c1d7661 *R/utility.R
680c56270b78e4afd2179015f38b2bb0 *README.md
0ba62ec81718fecb360d1869b7ba4759 *build/vignette.rds
b9ceed440d552867952b34760b72b8a8 *inst/CITATION
9a641633c626fff40908fde5be813790 *inst/doc/RBPSpecificity.R
32f1a542e0b948973e041edaead9ff73 *inst/doc/RBPSpecificity.Rmd
27cc8a143952def2e1472dc1a3d5d987 *inst/doc/RBPSpecificity.html
1a015571dc6708010547d4e60c7b1151 *inst/extdata/ENCODE_eCLIP_EIF4G2_K562_narrowPeak.bed
f76be02df014b07c353ca2cefa73f175 *inst/extdata/ENCODE_eCLIP_HNRNPC_K562_narrowPeak.bed
0aafcf36ba5763f9f52e61d5fe9dce33 *inst/extdata/ENCODE_eCLIP_PCBP2_HepG2_narrowPeak.bed
718f25cfa4d8a81d479ca4f91861bca8 *inst/extdata/ENCODE_eCLIP_RBFOX2_K562_narrowPeak.bed
a553e2d00cae25231a5dd0bc08841be0 *inst/extdata/RBNS_normalized_5mer.csv
cf7cc58ff0c016ec34d43ea1cd99eaa2 *inst/scripts/retrieve_extdata.R
33c668b44bfbf299b6ea430b3d3bc8b4 *man/RBPSpecificity-package.Rd
b91955aaba150e62a9d64d6ff87d3fec *man/calEnrichment.Rd
9d4df7c2b3bb07cecf015c96714d7663 *man/calSNVSens.Rd
4fa851a6685b54dab19701caa9c30261 *man/calSpecificity.Rd
659703686fe04fad79edcfea3936c3b4 *man/countKmers.Rd
bea479c5922490f594c850dd8f059955 *man/countKmersBkg.Rd
a97be3cc5a80e4d3fc3f41ff2506ba51 *man/figures/logo.png
5feb5cbe2c1e0dcc5ea17f61a3bd507c *man/findTopMotif.Rd
cc5d61f65df7414b1be3f09c099ea72b *man/formatSensitivity.Rd
0fd5e7e67c0d133fed6e37917a2bd898 *man/genMotifVar.Rd
8bab7ce0da27a3c12bcc09a126e00500 *man/genRNDist.Rd
6a023fa633ebb157924ae8ca302d08d4 *man/generateBkgSet.Rd
e7a03363f376a0fe87b55059c69246dd *man/generateBkgSetBatched.Rd
1be3b1b5fe033eba3bec6e3d94426175 *man/minmaxNorm.Rd
13e1d8bbaae15f5114bf01b854acb213 *man/motifEnrichment.Rd
965dd0e4c3a1bba48c7759798daf2c00 *man/normalizeScores.Rd
37406afaec6ef84cc5b51ff0036bff75 *man/peakParse.Rd
d1e462062d71d6adc40b82489cc3511e *man/plotSensitivity.Rd
ad5a600570286dc282d75393d1121850 *man/plotSpecificity.Rd
454975fbef16cd26c7cdb05c6fddc2e5 *man/returnSensitivity.Rd
a257068ff123685f13b987f0f7759278 *man/returnSensitivityAll.Rd
6a0396b1dc3873707e1a2a7206a62f90 *man/returnSensitivitySpecific.Rd
caad2d5da4f300ed245aef1bb11e0470 *man/returnSpecificity.Rd
c31a14402855a157b3fc864c57766bb2 *man/scrambleDNA.Rd
4211752eb71ffd1c85a0900f417975b8 *man/scrambleDNASet.Rd
48d505657f222b92363340167b50778e *man/selectGenome.Rd
6a36cba4b183b0095ce9f5e748e9e3ff *man/valInputMotif.Rd
25f51f7308c899433d855fe54c13c020 *man/validateGetSequenceInputs.Rd
b0188aa793a69a8b6002e369d1c5ff0d *tests/manual_check_rbps.R
22d3d352352ae14153e07144a8bcd5ca *tests/testthat.R
b142f5d5d785b559c7cce0d5c503050f *tests/testthat/setup.R
6b23930f20b4ffd85600d93c14364055 *tests/testthat/test-countKmers.R
a39899ce5e3f18410329cd7e721b09dc *tests/testthat/test-enrichment.R
a9fba6db78f958ba653160df5b925dca *tests/testthat/test-motifEnrichment.R
a31a00fcebc52571d5b91affb72a0054 *tests/testthat/test-rna.R
4e3a028a1f1b9595acb458b3f1ef365f *tests/testthat/test-sensitivity.R
c9c74006528354f2b2a4c736148141d3 *tests/testthat/test-specificity.R
4981466276d77365b9ec50b702dd6625 *tests/testthat/test-utility.R
ef0372af9a0c204e5a5cd782186b5696 *tests/testthat/test-visualization.R
32f1a542e0b948973e041edaead9ff73 *vignettes/RBPSpecificity.Rmd
