% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/extractMake.R
\name{extractMake}
\alias{extractMake}
\title{Copy dnaEPICO Makefile to a user directory}
\usage{
extractMake(destDir, overwrite = FALSE)
}
\arguments{
\item{destDir}{Character. Destination directory where the Makefile
will be copied.}

\item{overwrite}{Logical. Whether to overwrite an existing \code{Makefile} in
\code{destDir}. The default is \code{FALSE}.}
}
\value{
Character scalar containing the path to the copied \code{Makefile}.
}
\description{
Copies the example Makefile pipeline shipped with dnaEPICO to a
user-specified directory for local execution or modification.
}
\examples{
tmp <- file.path(tempdir(), "dnaEPICO-make-example")
dir.create(tmp, recursive = TRUE, showWarnings = FALSE)
makefile_path <- extractMake(
    destDir = tmp,
    overwrite = TRUE
)
stopifnot(file.exists(makefile_path))

}
