% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/result_classes.R
\docType{class}
\name{dnaEPICO_methylationLME-class}
\alias{dnaEPICO_methylationLME-class}
\alias{dnaEPICO_methylationLME}
\title{Result class returned by methylationLME}
\description{
Objects of class \code{'dnaEPICO_methylationLME'} are list-based results
returned by \code{\link[=methylationLME]{methylationLME()}}. They collect the prepared longitudinal
analysis table, fitted mixed models, summaries, diagnostics, annotations, and
optional saved files.
}
\section{Structure}{

\describe{
\item{preparedData}{Object returned by \code{\link[=prepareMethylationLMEData]{prepareMethylationLMEData()}}.}
\item{modelFits}{Object returned by \code{\link[=fitMethylationLMEModels]{fitMethylationLMEModels()}}.}
\item{modelSummaries}{Object returned by
\code{\link[=summarizeMethylationLMEModels]{summarizeMethylationLMEModels()}}.}
\item{significantInteractions}{Object returned by
\code{\link[=collectSignificantInteractionsMethylationLME]{collectSignificantInteractionsMethylationLME()}}.}
\item{diagnosticPlots}{Object returned by
\code{\link[=plotMethylationLMEDiagnostics]{plotMethylationLMEDiagnostics()}}.}
\item{annotation}{Object returned by
\code{\link[=annotateMethylationLMESummaries]{annotateMethylationLMESummaries()}}.}
\item{savedFiles}{Object returned by
\code{\link[=writeMethylationLMEOutputs]{writeMethylationLMEOutputs()}} when \code{saveOutputs = TRUE}, otherwise
\code{NULL}.}
}
}

\seealso{
\code{\link[=methylationLME]{methylationLME()}}
}
