Comprehensive Visualization and Analysis of Multi-Set Intersections

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Documentation for package ‘VennDetail’ version 1.25.2

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

VennDetail-package	VennDetail: Comprehensive Visualization and Analysis of Multi-Set Intersections
$.Venn	Extract a column from a Venn object
.add_colnames	Give first colname as RowNxyz
.make.table	make table for venndetail modified from make.truth.table (VennDiagram)
as.data.frame.Venn	Convert a Venn object to a data frame
compareVenn	Compare two Venn objects
create_interactive_vennpie	Create an interactive vennpie chart with plotly
detail	Get subset details from a Venn object
detail-method	Get subset details from a Venn object
detail-method	Get subset details from a Venn object
dim.Venn	Get the dimensions of a Venn object
dplot	Create a bar plot of subset counts
dplot-method	Create a bar plot of subset counts
getFeature	Extract feature data for specific subsets
getFeature Venn	Extract feature data for specific subsets
getFeature-method	Extract feature data for specific subsets
getSet	Extract specific subsets from a Venn object
getSet-method	Extract specific subsets from a Venn object
getSet-method	Extract specific subsets from a Venn object
head.Venn	Extract the first few rows of a Venn object
loadVenn	Load a Venn object from a file
make.subset	Get subset from list of input groups
make_subset	Create subsets from a list of sets
merge.Venn	Merge two or more venndetail obejcts
merge.Venn	Utility functions for VennDetail package
names.Venn	Extract subset names from a Venn object
newVenn	Create a new Venn object
plot.Venn	Plot a Venn object
result	Extract results from a Venn object
result-method	Extract results from a Venn object
result-method	Extract results from a Venn object
rowjoin	Join data.frames by row names or specified columns
rowjoin-method	Join data.frames by row names or specified columns
rowjoin-method	Join data.frames by row names or specified columns
saveVenn	Save a Venn object to a file
setcolor	return colors with given a vector
show Venn	Show the summary of venn object
show-method	Show method for Venn objects
show-method	Show the summary of venn object
summary.Venn	Give summary information of Venn object
summary.Venn	Return summary information about a Venn object
T2DM	T2DM Dataset
tail.Venn	Extract the last few rows of a Venn object
upsetPlot	Create an UpSet plot
upsetPlot-method	Create an UpSet plot for a Venn object
upset_plot	Create an UpSet plot for set intersection visualization
Venn-class	Class 'Venn' This class includes all information from venndetail
vennApp	Create an interactive Venn diagram app
VennDetail	VennDetail: Comprehensive Visualization and Analysis of Multi-Set Intersections
venndetail	Create a Venn object for set analysis
vennDiagram	Create a Venn diagram
vennDiagram-method	Create a traditional Venn diagram
vennEnrichment	Perform enrichment analysis on set intersections
vennpie	Create a Venn-pie visualization
vennpie-method	Create a Venn-pie visualization
vennStats	Perform statistical tests on set intersections
vennStats-method	Perform statistical tests on set intersections
[.Venn	Subset a Venn object