Convenient functions to streamline your single cell data analysis workflow

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Documentation for package ‘DOtools’ version 1.1.2

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

DO.Barplot	SEM Graph with wilcox test on single cell level
DO.BarplotClustert	SEM Graph with t test on cluster level
DO.BoxPlot	Box Graph with wilcox test on single cell level
DO.CellBender	DO.CellBender
DO.CellComposition	DO CellComposition
DO.CellTypist	DO Celltypist
DO.Correlation	DO Correlation Plot for visualizing similarity between categories
DO.DietSCE	Remove Layers from Seurat or SCE Object by Pattern
DO.Dotplot	DO Dot plot
DO.enrichR	DO.enrichR
DO.FullRecluster	DO.FullRecluster
DO.Heatmap	DO Heatmap of the mean expression of genes across a groups
DO.HeatmapFC	DO Heatmap of the mean expression of genes across a groups
DO.Import	DO.Import
DO.Integration	DO.Integration SCE object integration directly
DO.MultiDGE	DO.MultiDGE
DO.PyEnv	DO.PyEnv
DO.scVI	DO.scVI
DO.SplitBarGSEA	DO Bar plot for GSEA df result
DO.Subset	DO.Subset
DO.TransferLabel	DO.TransferLabel
DO.UMAP	DO.UMAP
DO.VlnPlot	Violin Graph with wilcox test on single cell level
DOtools	DOtools: A Toolkit for scRNA Data Analysis