BiocDuckDB-package	BiocDuckDB-package
annotateWithRegions,MultiAssaySpatialExperiment-method	MultiAssaySpatialExperiment-spatial
BiocDuckDB	BiocDuckDB-package
c,DuckDBDualSubset-method	DuckDBDualSubset-class
calculateAverage,DuckDBMatrix-method	DuckDBMatrix-scuttle
calculateCPM,DuckDBMatrix-method	DuckDBMatrix-scuttle
calculateTPM,DuckDBMatrix-method	DuckDBMatrix-scuttle
colPair<-,SingleCellExperiment,character,DuckDBSelfHits-method	SingleCellExperiment-pairs
colPair<-,SingleCellExperiment,missing,DuckDBSelfHits-method	SingleCellExperiment-pairs
colPair<-,SingleCellExperiment,numeric,DuckDBSelfHits-method	SingleCellExperiment-pairs
colPairs<-,SingleCellExperiment,DuckDBSelfHits-method	SingleCellExperiment-pairs
colTable	SingleCellExperiment-colTables
colTable,SingleCellExperiment,character-method	SingleCellExperiment-colTables
colTable,SingleCellExperiment,missing-method	SingleCellExperiment-colTables
colTable,SingleCellExperiment,numeric-method	SingleCellExperiment-colTables
colTable<-	SingleCellExperiment-colTables
colTable<-,SingleCellExperiment,character-method	SingleCellExperiment-colTables
colTable<-,SingleCellExperiment,missing-method	SingleCellExperiment-colTables
colTable<-,SingleCellExperiment,numeric-method	SingleCellExperiment-colTables
colTableNames	SingleCellExperiment-colTables
colTableNames,SingleCellExperiment-method	SingleCellExperiment-colTables
colTableNames<-	SingleCellExperiment-colTables
colTableNames<-,SingleCellExperiment,character-method	SingleCellExperiment-colTables
colTables	SingleCellExperiment-colTables
colTables,SingleCellExperiment-method	SingleCellExperiment-colTables
colTables<-	SingleCellExperiment-colTables
colTables<-,SingleCellExperiment-method	SingleCellExperiment-colTables
correlatePairs,DuckDBMatrix-method	DuckDBMatrix-scran
DuckDBDataFrame-spatial	DuckDBDataFrame-spatial
DuckDBDualSubset-class	DuckDBDualSubset-class
DuckDBMatrix-scran	DuckDBMatrix-scran
DuckDBMatrix-scuttle	DuckDBMatrix-scuttle
findMarkers,DuckDBMatrix-method	DuckDBMatrix-scran
geometricSizeFactors,DuckDBMatrix-method	DuckDBMatrix-scuttle
length,DuckDBDualSubset-method	DuckDBDualSubset-class
librarySizeFactors,DuckDBMatrix-method	DuckDBMatrix-scuttle
linkSpatialMap	linkSpatialMap
modelGeneCV2,DuckDBMatrix-method	DuckDBMatrix-scran
modelGeneVar,DuckDBMatrix-method	DuckDBMatrix-scran
modelGeneVarByPoisson,DuckDBMatrix-method	DuckDBMatrix-scran
MultiAssaySpatialExperiment-spatial	MultiAssaySpatialExperiment-spatial
normalizeCounts,DuckDBMatrix-method	DuckDBMatrix-scuttle
numDetectedAcrossFeatures,DuckDBMatrix-method	DuckDBMatrix-scuttle
pairwiseBinom,DuckDBMatrix-method	DuckDBMatrix-scran
pairwiseTTests,DuckDBMatrix-method	DuckDBMatrix-scran
perCellQCMetrics,DuckDBMatrix-method	DuckDBMatrix-scuttle
perFeatureQCMetrics,DuckDBMatrix-method	DuckDBMatrix-scuttle
readGeoParquetForMASE,character-method	MultiAssaySpatialExperiment-spatial
readParquet	readParquet
readParquetForMASE,character-method	MultiAssaySpatialExperiment-spatial
rowLoading	SingleCellExperiment-loadings
rowLoading,SingleCellExperiment,character-method	SingleCellExperiment-loadings
rowLoading,SingleCellExperiment,missing-method	SingleCellExperiment-loadings
rowLoading,SingleCellExperiment,numeric-method	SingleCellExperiment-loadings
rowLoading<-	SingleCellExperiment-loadings
rowLoading<-,SingleCellExperiment,character-method	SingleCellExperiment-loadings
rowLoading<-,SingleCellExperiment,missing-method	SingleCellExperiment-loadings
rowLoading<-,SingleCellExperiment,numeric-method	SingleCellExperiment-loadings
rowLoadingNames	SingleCellExperiment-loadings
rowLoadingNames,SingleCellExperiment-method	SingleCellExperiment-loadings
rowLoadingNames<-	SingleCellExperiment-loadings
rowLoadingNames<-,SingleCellExperiment,character-method	SingleCellExperiment-loadings
rowLoadings	SingleCellExperiment-loadings
rowLoadings,SingleCellExperiment-method	SingleCellExperiment-loadings
rowLoadings<-	SingleCellExperiment-loadings
rowLoadings<-,SingleCellExperiment-method	SingleCellExperiment-loadings
rowPair<-,SingleCellExperiment,character,DuckDBSelfHits-method	SingleCellExperiment-pairs
rowPair<-,SingleCellExperiment,missing,DuckDBSelfHits-method	SingleCellExperiment-pairs
rowPair<-,SingleCellExperiment,numeric,DuckDBSelfHits-method	SingleCellExperiment-pairs
rowPairs<-,SingleCellExperiment,DuckDBSelfHits-method	SingleCellExperiment-pairs
rowTable	SingleCellExperiment-rowTables
rowTable,SingleCellExperiment,character-method	SingleCellExperiment-rowTables
rowTable,SingleCellExperiment,missing-method	SingleCellExperiment-rowTables
rowTable,SingleCellExperiment,numeric-method	SingleCellExperiment-rowTables
rowTable<-	SingleCellExperiment-rowTables
rowTable<-,SingleCellExperiment,character-method	SingleCellExperiment-rowTables
rowTable<-,SingleCellExperiment,missing-method	SingleCellExperiment-rowTables
rowTable<-,SingleCellExperiment,numeric-method	SingleCellExperiment-rowTables
rowTableNames	SingleCellExperiment-rowTables
rowTableNames,SingleCellExperiment-method	SingleCellExperiment-rowTables
rowTableNames<-	SingleCellExperiment-rowTables
rowTableNames<-,SingleCellExperiment,character-method	SingleCellExperiment-rowTables
rowTables	SingleCellExperiment-rowTables
rowTables,SingleCellExperiment-method	SingleCellExperiment-rowTables
rowTables<-	SingleCellExperiment-rowTables
rowTables<-,SingleCellExperiment-method	SingleCellExperiment-rowTables
scoreMarkers,DuckDBMatrix-method	DuckDBMatrix-scran
SingleCellExperiment-colTables	SingleCellExperiment-colTables
SingleCellExperiment-loadings	SingleCellExperiment-loadings
SingleCellExperiment-pairs	SingleCellExperiment-pairs
SingleCellExperiment-rowTables	SingleCellExperiment-rowTables
spatialCoordinateSystems	spatialCoordinateSystems
spatialElementJoin	spatialElementJoin
spatialJoin,DuckDBDataFrame,DuckDBDataFrame-method	DuckDBDataFrame-spatial
spatialMatch,DuckDBDataFrame,DataFrame-method	DuckDBDataFrame-spatial
spatialMatch,DuckDBDataFrame,DuckDBDataFrame-method	DuckDBDataFrame-spatial
spatialOverlaps,DuckDBDataFrame-method	DuckDBDataFrame-spatial
spatialViews	spatialViews
subsetByBoundingBox,MultiAssaySpatialExperiment-method	MultiAssaySpatialExperiment-spatial
subsetByPolygon,MultiAssaySpatialExperiment-method	MultiAssaySpatialExperiment-spatial
sumCountsAcrossFeatures,DuckDBMatrix-method	DuckDBMatrix-scuttle
summarizeAssayByGroup,DuckDBMatrix-method	DuckDBMatrix-scuttle
summaryMarkerStats,DuckDBMatrix-method	DuckDBMatrix-scran
validateSpatialMap	validateSpatialMap
writeDatapackage	writeDatapackage
writeParquet	writeParquet
writeParquet,ANY-method	writeParquet
writeParquet,Assays-method	writeParquet
writeParquet,data.frame-method	writeParquet
writeParquet,DataFrame-method	writeParquet
writeParquet,DuckDBDataFrame-method	writeParquet
writeParquet,DuckDBGRanges-method	writeParquet
writeParquet,DuckDBGRangesList-method	writeParquet
writeParquet,DuckDBSelfHits-method	writeParquet
writeParquet,DuckDBTable-method	writeParquet
writeParquet,DuckDBTransposedDataFrame-method	writeParquet
writeParquet,ExperimentList-method	writeParquet
writeParquet,GenomicRanges-method	writeParquet
writeParquet,GenomicRangesList-method	writeParquet
writeParquet,List-method	writeParquet
writeParquet,list-method	writeParquet
writeParquet,MultiAssayExperiment-method	writeParquet
writeParquet,MultiAssaySpatialExperiment-method	writeParquet
writeParquet,PointsLayerList-method	writeParquet
writeParquet,SelfHits-method	writeParquet
writeParquet,ShapesLayerList-method	writeParquet
writeParquet,SingleCellExperiment-method	writeParquet
writeParquet,SummarizedExperiment-method	writeParquet
writeParquet,TransposedDataFrame-method	writeParquet
writeStreamingResource	writeStreamingResource
[,DuckDBDualSubset,ANY,ANY,ANY-method	DuckDBDualSubset-class
[<-,DuckDBDualSubset,ANY,ANY,ANY-method	DuckDBDualSubset-class
