Package: alabaster.files
Title: Wrappers to Save Common File Formats
Version: 1.11.1
Date: 2026-09-04
Authors@R: person("Aaron", "Lun", role=c("aut", "cre"), email="infinite.monkeys.with.keyboards@gmail.com")
License: MIT + file LICENSE
Description: Save common bioinformatics file formats within the
        alabaster framework. This includes BAM, BED, VCF, bigWig,
        bigBed, FASTQ, FASTA and so on. We save and load additional
        metadata for each file, and we support linkage between each
        file and its corresponding index.
Depends: alabaster.base,
Imports: methods, S4Vectors, BiocGenerics, Rsamtools
Suggests: BiocStyle, rmarkdown, knitr, testthat, VariantAnnotation,
        rtracklayer, Biostrings
VignetteBuilder: knitr
biocViews: DataRepresentation, DataImport
Encoding: UTF-8
Config/roxygen2/version: 8.1.0
Config/pak/sysreqs: libbz2-dev liblzma-dev libssl-dev libnode-dev
        xz-utils zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-09-08 07:30:28 UTC
RemoteUrl: https://github.com/bioc/alabaster.files
RemoteRef: HEAD
RemoteSha: 53a145b9c94fb6f692343f3f4a97a5fa596cef4c
NeedsCompilation: no
Packaged: 2026-09-08 14:49:03 UTC; root
Author: Aaron Lun [aut, cre]
Maintainer: Aaron Lun <infinite.monkeys.with.keyboards@gmail.com>
Built: R 4.6.1; ; 2026-09-08 14:51:39 UTC; windows
