75673927e3869f82667bf8954c9ebca6 *CITATION
336e78c96237a8c10e0520d149785a61 *DESCRIPTION
d7fd3f8dcfa216906922adb0dde809c9 *INDEX
755265216dea1f0dbaa86afa88681180 *Meta/Rd.rds
2c3e3d580520d112c6c0f3e7a3dce13d *Meta/data.rds
8bd78fe4d71c3aeb1a0f4982ee51622b *Meta/features.rds
b0445b8acfde8b113eb76481237ddbb7 *Meta/hsearch.rds
ed1fc12a94ef288252635b0d56d16239 *Meta/links.rds
ad9d973d8ae929e70cb23db7b5dc6e8d *Meta/nsInfo.rds
9310569ef865c007c288e7f2ca7c5dce *Meta/package.rds
4c2ff84ba5c163b0be4d7822771802ae *Meta/vignette.rds
fc136619efee2929659a442152e2c569 *NAMESPACE
783b8be6ce9820a0199cdae817a49749 *NEWS.Rd
d6c68f1fe41ced6e98a766a3757313da *R/bsseq
c9eabe743414cf1c0650c29f31f5f556 *R/bsseq.rdb
bdc9749055bd1c9b609a110d45d1a0eb *R/bsseq.rdx
93aeafbc69d6d38ae984f1d19ca09e09 *README.md
ec746595d0d37327ef489856084262b2 *data/BS.chr22.rda
1eb3028e114addfdb22378e4aaf2f0fc *data/datalist
68b298e8a84cf403c073faafc3a268c8 *doc/Longread_guide.R
0a08322cf5cfb8ecd05b7a03720e4714 *doc/Longread_guide.Rmd
e9773f08b0c13aa49b71ec7f0316d96a *doc/Longread_guide.html
2c1d0973a35bb797b2934c40855f25ac *doc/bsseq.R
42868f5297b2638b195d325f97fd1d12 *doc/bsseq.Rmd
5861ad262576b6724cd475b7bf02ee18 *doc/bsseq.html
308f4fd1cf7044adae2d1fa4b3b391e5 *doc/bsseq_analysis.R
b53b9896f669115df1547d18c504cf86 *doc/bsseq_analysis.Rmd
338588a04a2acc856e7e56effd8e261a *doc/bsseq_analysis.html
0cf076f88de2214a573c83e326e1c1cd *doc/index.html
7ef001b884f55112e3b3032887a3f81e *extdata/HG002_nanopore_test.bedMethyl.gz
0568a4c5c3568cff8884ff36d9e0795d *extdata/HG002_pacbio_test.bedMethyl.gz
472855705ee6965905842df913e91259 *extdata/longread/silversides/all_cpgs/AA1.bedmethyl.gz
80fff1583446ee8e1f3c688dc018f28f *extdata/longread/silversides/all_cpgs/AA2.bedmethyl.gz
057c60d25bd84830d4b8dae4a8636f97 *extdata/longread/silversides/all_cpgs/AA3.bedmethyl.gz
79eaf4892dc4be0926565d1daa68fa39 *extdata/longread/silversides/all_cpgs/AR1.bedmethyl.gz
8f688d8366ccf6bdeba6c77eda8a04c5 *extdata/longread/silversides/all_cpgs/AR2.bedmethyl.gz
0eece163be3660daed68e9469e61d3a1 *extdata/longread/silversides/all_cpgs/AR3.bedmethyl.gz
74ac82da0db93013cfe3c1fd9192fa60 *extdata/longread/silversides/all_cpgs/RR1.bedmethyl.gz
ba54da921acd3da31ca78315301223ab *extdata/longread/silversides/all_cpgs/RR2.bedmethyl.gz
b3be8b137469d4052e097158dfe4b129 *extdata/longread/silversides/all_cpgs/RR3.bedmethyl.gz
fddd9f05093b0528225471991bc015b1 *extdata/longread/silversides/mc_filtered.hdf5/assays.h5
8e1216966065d0e06d852e167c6e839c *extdata/longread/silversides/mc_filtered.hdf5/se.rds
99351e8ee3ba738e78e743c6c91068b2 *extdata/longread/silversides/ref_cpgs/AA1.bedmethyl.gz
f3c8aee24e6bc9e3b25bd4e1a31c1145 *extdata/longread/silversides/ref_cpgs/AA2.bedmethyl.gz
38f731cd25fa02a38fa7ffc17af55e42 *extdata/longread/silversides/ref_cpgs/AA3.bedmethyl.gz
7ff85a8d96bfbf7296f28b237a46b69a *extdata/longread/silversides/ref_cpgs/AR1.bedmethyl.gz
608fa89255042ce18b6eca9465a3562f *extdata/longread/silversides/ref_cpgs/AR2.bedmethyl.gz
6c33538ed3cc236d43609afce45d4354 *extdata/longread/silversides/ref_cpgs/AR3.bedmethyl.gz
72a07052af6457cd6885de8362fb304f *extdata/longread/silversides/ref_cpgs/RR1.bedmethyl.gz
5acf5ba38c3cfdcc6eeea017f2484cc2 *extdata/longread/silversides/ref_cpgs/RR2.bedmethyl.gz
31effd05d035aa089aaac5321af21824 *extdata/longread/silversides/ref_cpgs/RR3.bedmethyl.gz
e720da6ab24303994ef3393d878d0d0a *extdata/modbam2bed/ctr1.chr10.chr11.bed.gz
b9b893ffba3cab4b9d44c026f52003c4 *extdata/modbam2bed/ctr2.chr10.chr11.bed.gz
e2d58e241320aea7d7f715dc719f1454 *extdata/modbam2bed/ctr3.chr10.chr11.bed.gz
9fe68dc98602f747df5effb8f2aed803 *extdata/modbam2bed/tret1.chr10.chr11.bed.gz
082df5c7dea37caf2d342ede2098d86c *extdata/modbam2bed/tret2.chr10.chr11.bed.gz
260d2a828add4ff4131e7cea380e649d *extdata/modbam2bed/tret3.chr10.chr11.bed.gz
663d85ed581fa27d7cd368b36f38896d *extdata/modkit/Hypo1.first50Bed.txt
5c30ea0ba02ad252ed80d32d6ab0b6f1 *extdata/modkit/chr21.chr22.HG002.top1000.bed.gz
ba62ab79f68a3d20f3ccc6857fa167a4 *extdata/test_data.cytosineReport.gz
96bb105e35e4b0b0a0ae04d168239996 *extdata/test_data.fastq_bismark.bismark.cov.gz
4e2130d4939df3f977ae9bce5d8d52a7 *help/AnIndex
d58e0c5f80535adc66624a5c5851fd4b *help/aliases.rds
1cc293a90b798965d340924408d141a6 *help/bsseq.rdb
d8311468f0c21e78f9e9d3e44095b5b1 *help/bsseq.rdx
63d734eee55907fe4eb24bea3f8952e4 *help/paths.rds
867e5ae1c7ea9333552a3f6173cba11f *html/00Index.html
ee41876c0116916bb04bcf4fe3e43d78 *html/R.css
c4dea70938887c8acb54bcaea71ca342 *libs/x64/bsseq.dll
1350486b5f5e82f81051cc562867371b *libs/x64/symbols.rds
7e152cd21df27b9b8b2e65111cb30edc *scripts/get_BS.chr22.R
