# Generated by roxygen2: do not edit by hand

export(decemedip)
export(getRoiReadCount)
export(getSummaryOnPi)
export(makeReferencePanel)
export(plotDiagnostics)
import(Rcpp)
import(methods)
importClassesFrom(GenomicRanges,GRanges)
importClassesFrom(SummarizedExperiment,SummarizedExperiment)
importFrom(GenomicRanges,countOverlaps)
importFrom(GenomicRanges,granges)
importFrom(GenomicRanges,resize)
importFrom(MEDIPS,MEDIPS.createROIset)
importFrom(MEDIPS,genome_count)
importFrom(R.utils,withTimeout)
importFrom(RcppParallel,RcppParallelLibs)
importFrom(S4Vectors,DataFrame)
importFrom(SummarizedExperiment,"colData<-")
importFrom(SummarizedExperiment,"rowData<-")
importFrom(SummarizedExperiment,assays)
importFrom(SummarizedExperiment,colData)
importFrom(SummarizedExperiment,ncol)
importFrom(SummarizedExperiment,nrow)
importFrom(SummarizedExperiment,rowData)
importFrom(dplyr,mutate)
importFrom(dplyr,rename)
importFrom(ggplot2,xlim)
importFrom(magrittr,"%>%")
importFrom(methods,is)
importFrom(purrr,map_dfc)
importFrom(rlang,.data)
importFrom(rstan,sampling)
importFrom(rstantools,rstan_config)
importFrom(stats,cor)
importFrom(stats,quantile)
importFrom(utils,data)
useDynLib(decemedip, .registration = TRUE)
