Changes in version 0.99.1 - Updated installation instructions in the README file. - Added funding information to the DESCRIPTION file. - Vignette: - Merged the three previous vignettes into a single vignette covering the methodology, main usage, interpretation of diagnostic plots, and interoperability with other Bioconductor packages. - Adopted BiocStyle for vignette formatting. - Added detailed explanations and interpretation guidelines for individual diagnostic plots. - Added descriptive names to the diagnostic plots returned by plotNormScoreDiagnostics(). - Added individual functions for generating each diagnostic plot separately. - Corrections: - Corrected NormalyzedDE to NormalyzerDE. - Removed duplicated https:// prefixes in the DESCRIPTION file. - Corrected additional grammatical and typographical errors. Changes in version 0.99.0 - Initial development version. - Basic package structure, documentation, and testing framework established. - Core functionality will be added in upcoming versions.