ae0800c6769e702cbb3436cc93e5df6ad62e915336ef052ad8619f002fc5edd9 3194 CITATION
224047c7865270334d0a0a5aede80f15f8976bacff50ef1d9db2453c19e5b63d 2040 DESCRIPTION
c45f77ea6f5fedefd6d9fefc48ac6366034e5cf7fcba548773281852e5bef7ab 1976 INDEX
5fb57fbe8bb986260b8da738621205a007d5d790d991573f3bd486c3bf3fc24c 1212 Meta/Rd.rds
47b793858788651ec7a4b861bd940d240a2af40f73ca271636099a01eb3f825a 130 Meta/data.rds
04abba1fbf14e9ebfa5018fd8a740842010982b85aad6aef0f672275b088d982 122 Meta/features.rds
2494350aa6bac9b06737d0eedcd495e4c6d2bf13fb17ccfde33c82757d2e0d0a 1151 Meta/hsearch.rds
546f0fcee6fa805738d6c3d5e564d5dcc16bdbd4d6b495395fa7263cb5320e31 478 Meta/links.rds
11ff8af114c95bb99a8f8ea432375c089e52d2bb109863ce75be11b1b9d5b08a 1915 Meta/nsInfo.rds
36b484f5078537509044a1ea655a42aa05dee79b402b408b3a677333a8164b65 1939 Meta/package.rds
cd0fcab5975efb149e4d1c411ff51bc9e33941c561edd0515904b22b0f7955c9 204 Meta/vignette.rds
10268d242d2d0d57352d9f6ad4fbb06434423dfbc1f8d94d5275afc3ebd68755 5517 NAMESPACE
f1d3541fdd286af5f207be90b38554638e074b5e1d8a5e9e471b7679e2624630 318 NEWS
570ca456b280cdeb201ef5ebdf22dc8f80092e2c0c68e33c7f73340e420f3759 1058 R/GUIDEseq
e9c2a99903d694618f17cd31ecf62171ce3659ff155722ddcd54ba243d75a6cb 192014 R/GUIDEseq.rdb
f071d83a01032acf2d4099612830784d67e6865b7fdd935e4d14245b49579a38 969 R/GUIDEseq.rdx
3d99e6888876adb857a00cd9b5e198741550bdbc86f1d86825146b457c1b5c7b 32644 data/peaks.gr.rda
55d8de58411a90cf0daf5182592b021d2f1e79568e3625491f12d5e6441ff67c 100548 data/uniqueCleavageEvents.rda
0962869adc998cf470dafcb0959eedcff91ec7df78093385c9ee1283260cf8d4 3267 doc/GUIDEseq.R
5a3d3b32f5d13aa6d120a1dd1544a995913ec0c43c61f3aaf5a6eddb268dc8ec 13342 doc/GUIDEseq.Rnw
8532f1c14768e9006fdfeb569c1eb974ae2b84fbfbe89771671196a97b46452d 165965 doc/GUIDEseq.pdf
9e722d1d2d0bda98f875245657a79ec1e04c382ed178b42d2255cef8e17532ae 1370 doc/index.html
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ad9666d91b661fcaf15206e7b2aed069d24a41c8b2286a8c9514b3e5cde9e51a 160 extdata/1450-chr14-chr2-bulge-test.bed
8d49e78a477980807026fb3e841e884202d47ee781d0d338707607707342fc15 27 extdata/1450.fa
50732a8447a43e3cf6893749bb2b8421ca4cb1b58663fbb4306bb84899829543 86585 extdata/1450peakSeq.RDS
ca521ddb3b4226d0f38259e33549a6aa34a4e22f363dd35826ab6dcb90af9eb3 213529 extdata/InsertionInOfftarget.RDS
609981f688554731aa7bcc4ac0f24b741b539cd99c745825e9873e1abbfd3cc6 38518 extdata/NatureBiot2016SuppTable19DoenchRoot.xlsx
9b98b2e0e34d56274d737b9cea0c869fd1fd2741b2d0cab8d6e08e2e044e40dd 10655 extdata/OT71_Bulge_example.xlsx
f45938630b35fb136250e9782c2bad654a2cae05e71aa1dd62115387b1af6ab0 44317 extdata/PEtagAnalysis_testthat.RDS
a7bc3e9487ced1f2f00822a3205cd60b0680829787e68d54af6635dc78f9f1c1 28 extdata/T2.fa
6e36711718cc07555874f57c60f485be58902dd8064935414e2891465204b16c 9595 extdata/T2plus100OffTargets.bed
dbe0788210e1eea12294ae772fa90e83b87ef2b81b318e7bf3de6e27c1326216 348314 extdata/UMI-HEK293_site4_R1.txt
f0816d7203867e490fed4c5149d68236d14f64fb003f5dbf4ae4e6ee6e6c955a 1911222 extdata/UMI-HEK293_site4_chr13.txt
55ca53ec42e5482d6d25b6772b64cd784d274d7856a3954c24fdd2b5d34e0815 1652 extdata/UMI-testGetUmi.fastq
0c5c3ab3f01da3ed9604e653a30201f42d71418aff79dfeaa9d4eba3a3580924 585 extdata/alns.RDS
ce62467753eac4a5f26defa5c20b33e6a2f9f2110c4e80077e2e32316a63ea48 827270 extdata/bowtie2.HEK293_site4.sort.bed
ade5ed112a363d3464a5536d4c4a02db9a2b50615c6a5cc5f868b49a40838b30 3171141 extdata/bowtie2.HEK293_site4_chr13.sort.bam
43104e8a9794ab4dd6c18f1cda36ea570cc5bee0960fefab4f29c877f65a6ec8 4661605 extdata/bowtie2.HEK293_site4_chr13.sort.bed
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7bebf0df0ca93f7fab4e311f498b4a35b3ae099eccad1ce474d3746c95e2483a 472 extdata/consecutiveDNABulge.RDS
2d20fb0fdabac4ded668a75cc54f7debaa0820901261e9d57ae29bb7361e524b 54 extdata/consecutiveDNABulge.bed
ee49f5b74fa421b672f410c97ced2a425dc670dcb0db82de789a03b6c8290b66 476 extdata/consecutiveDNABulge2.RDS
5e74dc8e94e30062c37dfcc657f84bb1ae478017b6da94a4494be1d20f7f8456 24371 extdata/forVisualization/mergedOffTargets.txt
583cd7c54ec04d36aaf8ce555aed1d6ca8f89cf8d10f7fbf16ed3c395864d300 22489 extdata/forVisualization/offTargetsInPeakRegions.xls
28d7c71a8eb4d85953687b86d59300ece2a31a03213bd86b895bd9cf9941940f 160 extdata/gRNA-PlusMinusPeaksMerged.bed
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924147653ea982c8028193ee30403ede7d07936a95857c6abe1e434e05e44af3 1065 extdata/getUmi.pl
6ebf68f938920d15fd69d7d1bf1fd441803eb6c07a1ab797dd64e7f18f7591fe 36 extdata/p5.index
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057acf7bec0173bb89eb5a974486fe547a0cc15b5fb70b8cd29dd812219a1ed6 107990 extdata/pa.f.RDS
2b52e688803c13be3876a40a00ea2035b46a30001a89fabc2da6a112a731d7c5 108162 extdata/pa.r.RDS
dc52690ec46a7aba6907012dfc3d6f7ea357f412cf43756f6764f6838a34587e 785 extdata/sample1-17/offTargetsInPeakRegions.xls
1c5f00a32f93e26a9c4513a102d320b15f8ea3b4d47becf1f1167f35a542f9cc 23170 extdata/sample2-18/offTargetsInPeakRegions.xls
369efe4aa706c490768f6f4069cf30a6aea7a9e2ba53fa0b93b55d1430255162 3665 extdata/sample3-19/offTargetsInPeakRegions.xls
575e62fd6317fc3e70e28b4c79472727e80dedacefaf1007fa9cbec0b7f15349 19906 extdata/sample4-20/offTargetsInPeakRegions.xls
0dc72f97bfa99afbde97a10955b09fb160ad7a0cc9452ea10819dc96402beeaf 6224 extdata/sample5-21/offTargetsInPeakRegions.xls
faf6e00c909aae0dbd78e7a76e5543bc098cdea945765523269092dd49c74a67 4031 extdata/sample6-22/offTargetsInPeakRegions.xls
f72752f0ad8039e5db268985166500519366cc79913b728c75749f3262b5fa1e 12494 extdata/sample7-23/offTargetsInPeakRegions.xls
0e97678c1716b255c99b74c74f7bbcbd3176b1c20acf861b14da2aea8509457d 91286 extdata/subjects2.RDS
7156bc2f595c4a29287502b2a9569057976ce1b015637c9a051f60dcf049a611 770 extdata/testCFDscoringWithBulge.RDS
2af4e2f117e7624ecc1ee79b926a5445df76ecc1e86e024fcbbf6565465c618c 10453 extdata/testGetUmi/testGetUmi.fastq
345dcb151b7a4198a50a3582e77535cde43d2ff0de1b6e67d67c0b7bf99d8888 588 extdata/testPeaks.rda
da6264962a33b4864950bd0b64a87a168001e5a7961901f358eacd4464f0b094 708 extdata/testbothRunSum.rda
f9d871cd9b95599fcab5b3b1521b50795cb21329ef724dac2f7404c459e5976d 786 help/AnIndex
1a206fb9c8560ac118f4bd95bb0af2ce17dc011758b91292408594d3b1c531a1 90500 help/GUIDEseq.rdb
30820a41a21106652ebf7df200035e8ec977c1b564fcf2d6881c331bbc2257b5 705 help/GUIDEseq.rdx
032abab8fb37aae58e1c2f19de6257c9e1860fc3821bccba1828b7e41b67d1d1 342 help/aliases.rds
c289f32e65a89bdcb9d661e380b086fa7794379eb3e93a7f5e3cd31704cd63a9 457 help/paths.rds
440311c8f77c981193d05e6919a33e80e319a39535c7f1acb79d444a5443fa52 4402 html/00Index.html
3d290675266eebeba6efff07db879d699843c80bf428f9e71000e2fc6078f5db 2133 html/R.css
