816ac644f4c788dac8d4b39bf76ef801 *DESCRIPTION
1ebbd3e34237af26da5dc08a4e440464 *LICENSE
0a7103eb01025d59d21afae18eb614cd *NAMESPACE
fdebc56091375eaa535f44d026863ae7 *R/PIUMA_Distances.R
f828719c8ca7a0521d676425d37893d5 *R/PIUMA_Enrichment.R
a006cb94ec0005b57788f95c43fb17f6 *R/PIUMA_Generics.R
f4b51c64aedd95f2fe6d8f201fb740c9 *R/PIUMA_Import.R
041a33a81910e5c4bf8fcde51456c2af *R/PIUMA_ImportSE.R
08a0071c3acc4099ef6e695a027ab936 *R/PIUMA_Jaccard.R
80c86e622c230c8b630c3dbaa7a93e8a *R/PIUMA_MapperCore.R
839f6db46823c8ad2c614e3e73bd4fbb *R/PIUMA_Methods.R
d874634cfc2ab57110af6d597d69e5c1 *R/PIUMA_Projection.R
ab6878fc8a8312ed8ecbb06358578957 *R/PIUMA_TDAobj.R
473edd3351ea49570bc19cd69295e552 *R/PIUMA_assessTDA.R
c9807691af356898ed189858569788c0 *R/PIUMA_packagepage.R
296dd12f62dc31b963c9833dcd611e37 *R/PIUMA_testdata.R
a61f8e2fe6e1476d21abe1f0c10ddc08 *R/PIUMA_utils.R
76d77fdbbf6556ff05bb2788641618c9 *README.md
635345cce041b2cca740bef946ee8f04 *build/vignette.rds
87fd3428ceef00b101d075e2094eb042 *data/df_test_proj.rda
86e01905225d455d15e36f99c28db482 *data/tda_test_data.rda
ea45c02ac6718e20d561091c8ffc95fe *data/vascEC_meta.rda
29511947218180abb36d5c5c8529b033 *data/vascEC_norm.rda
f590d1e6c066eadaa3eee9955048553f *inst/NEWS
1476cff25ef091780afc7b165806efc2 *inst/doc/PIUMA_vignette.R
86334b1c2401e53859d3fc0e15a785c7 *inst/doc/PIUMA_vignette.Rmd
55d56f1d789ba01985c69ec8b73afdb8 *inst/doc/PIUMA_vignette.html
f0397d91bd0ec10a88543c635045df9b *man/PIUMA.Rd
e4bdade74c231807c661b6e6fa29fd7c *man/TDAobj-class.Rd
cbee55fb262dc03d9961092d58dfbe62 *man/checkNetEntropy.Rd
4ad7dd69b467ec245a08f107e2dece19 *man/checkScaleFreeModel.Rd
64aea04f17cac04e2c5861e385752585 *man/dfToDistance.Rd
34bb6eee0ddbf796a8258d788078b9bc *man/dfToProjection.Rd
0e9d4228ea32fd754b055b784a082f86 *man/df_test_proj.Rd
8695d2cbe90e5373c50da5db04c0b41f *man/figures/logo.png
745d9dacfb186c4157731fc79c6bde7f *man/getComp.Rd
4f91a63b2f459e3077f05872a4c960fe *man/getDfMapper.Rd
eecf4c1bdd0b30e3cea5d3abd5b670a0 *man/getDistMat.Rd
cf784cbe31a58abaf83e448daac54006 *man/getJacc.Rd
31a4e855100ad5f2edc13056582d972f *man/getNodeDataMat.Rd
4c3b741f275230719e0db9cb09c57c8f *man/getOrigData.Rd
f6511248a400c0f48e347e036b503445 *man/getOutcome.Rd
e169730f459c60388be034f4af0fb13e *man/getOutcomeFact.Rd
9d51865964ac07c8a87bed081da15881 *man/getScaledData.Rd
0ae3251815f89dca6900434df9901e3e *man/jaccardMatrix.Rd
86c3ff410acfffa888692f4863ef29b5 *man/makeTDAobj.Rd
5f6ab84105a15a063bd86f0148ebc733 *man/makeTDAobjFromSE.Rd
36b35ac5ddbe3341d4ac9be34f688da9 *man/mapperCore.Rd
b455e0033b3a169557d08987ccf8133a *man/setComp.Rd
5a523581191c9441d0f2c745691f41cb *man/setDfMapper.Rd
9cd7e44d49a515c15034217f9c9ab6cf *man/setDistMat.Rd
a79943ad908a0ca371d31edbdf766694 *man/setJacc.Rd
f4d2f791dd5b69b91c1fbeea06485b57 *man/setNodeDataMat.Rd
8fcc4661036cc28628e1cfde958d99a9 *man/setOrigData.Rd
c2db0c9064376ac57e19d4055c8451c6 *man/setOutcome.Rd
7c8a68deecfd2d98e3adbc42ca727ed3 *man/setOutcomeFact.Rd
6d3c40e9dd7c4dbc0c1181ccf730b8d6 *man/setScaledData.Rd
d159ece17db0a066c4d7347b72e62262 *man/tdaDfEnrichment.Rd
c29f593de577f6e2b91dea3c111c1c7b *man/tda_test_data.Rd
20fd70996c4c9bec488617e2479dfed5 *man/vascEC_meta.Rd
52552bc51e02cf8304392af7d28536b9 *man/vascEC_norm.Rd
d8f78f3aef02128436aa4651185be2a4 *tests/testthat.R
fdc3c34b5edbac3cc462e18f185e7508 *tests/testthat/test_PIUMA_Distances.R
776b5692716f69bb7cb15977a5897395 *tests/testthat/test_PIUMA_Enrichment.R
f7a9ad1b9305f020af2fea452c6abbf8 *tests/testthat/test_PIUMA_ImportSE.R
dfdaaef1c042a952c50461881f979765 *tests/testthat/test_PIUMA_Jaccard.R
55589bf549a4226296f001b6fdc379e2 *tests/testthat/test_PIUMA_MapperCore.R
da3f63f1715fea8d5ad094ca3d8efdc3 *tests/testthat/test_PIUMA_Projection.R
7dc66df7e2663248af024443fa1a3beb *tests/testthat/test_PIUMA_assessTDA.R
a1560b5afb7d3f4d7497f4367ca827d3 *tests/testthat/test_PIUMA_import.R
04ff05e501e5f513b1f875638677d14d *vignettes/CytoscapeOutput.svg
418af06465d86a882f8f4c2ba4275e47 *vignettes/Logo.svg
86334b1c2401e53859d3fc0e15a785c7 *vignettes/PIUMA_vignette.Rmd
ee3b9057ca572d0fba828742311e6331 *vignettes/TDAobj.svg
cc075ad0f9988d80fad1175f784a1678 *vignettes/library.bib
