Package: ADAMgui
Type: Package
Title: Activity and Diversity Analysis Module Graphical User Interface
Version: 1.28.0
Date: 2021-09-01
Authors@R: 
    c(person(given = "Giordano Bruno",
                 family = "Sanches Seco",
                 role = "aut",
                 email = "giordano.bruno@unesp.br"),
      person(given = "André Luiz",
                 family = "Molan",
                 role = "ctb"),
      person(given = "Agnes",
                family = "Takeda",
                role = "ctb"),
      person(given = "Jose",
                family = "Rybarczyk Filho",
                role = c("ctb", "cre", "ths"),
                email = "jose.luiz@unesp.br")
			 )
Maintainer: Jose Luiz Rybarczyk Filho <jose.luiz@unesp.br>
Depends: R(>= 3.6), stats, utils, methods, ADAM
Suggests: markdown, BiocStyle
Imports: GO.db (>= 3.5.0), dplyr (>= 0.7.6), shiny (>= 1.1.0), stringr
        (>= 1.3.1), stringi (>= 1.2.4), varhandle (>= 2.0.3), ggplot2
        (>= 3.0.0), ggrepel (>= 0.8.0), ggpubr (>= 0.1.8), ggsignif (>=
        0.4.0), reshape2 (>= 1.4.3), RColorBrewer (>= 1.1-2),
        colorRamps (>= 2.3), DT (>= 0.4), data.table (>= 1.11.4),
        gridExtra (>= 2.3), shinyjs (>= 1.0), knitr, testthat
Description: ADAMgui is a Graphical User Interface for the ADAM
        package. The ADAMgui package provides 2 shiny-based
        applications that allows the user to study the output of the
        ADAM package files through different plots. It's possible, for
        example, to choose a specific GFAG and observe the gene
        expression behavior with the plots created with the
        GFAGtargetUi function. Features such as differential expression
        and foldchange can be easily seen with aid of the plots made
        with GFAGpathUi function.
biocViews: GeneSetEnrichment, Pathways, KEGG
VignetteBuilder: knitr
LazyLoad: yes
NeedsCompilation: no
Encoding: UTF-8
RoxygenNote: 6.1.1
License: GPL (>= 2)
URL: TBA
BugReports: https://github.com/jrybarczyk/ADAMgui/issues
Config/pak/sysreqs: cmake make libicu-dev libpng-dev libuv1-dev
        libssl-dev zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2026-04-28 12:50:04 UTC
RemoteUrl: https://github.com/bioc/ADAMgui
RemoteRef: RELEASE_3_23
RemoteSha: 1e3639e8d6e35c7998b84b5ed7505530c3613b7c
Packaged: 2026-04-29 18:07:54 UTC; root
Author: Giordano Bruno Sanches Seco [aut],
  André Luiz Molan [ctb],
  Agnes Takeda [ctb],
  Jose Rybarczyk Filho [ctb, cre, ths]
Built: R 4.6.0; ; 2026-04-29 18:50:07 UTC; unix
