BSData-class            BSData object
BSDMCs-class            BSDMCs object
cBSData-method          cBSData method
cBSDMCs-method          cBSDMCs method
combine-method          combine method
data                    data
DMCHMM-package          Differentially Methylated CpG using Hidden
                        Markov Model
findDMCs-method         findDMCs method
manhattanDMCs-method    manhattanDMCs method
methHMEM-method         methHMEM method
methHMMCMC-method       methHMMCMC method
methLevels-method       methLevels method
methReads-method        methReads method
methStates-method       methStates method
methVars-method         methVars method
params                  params
qqDMCs-method           qqDMCs method
readBismark-method      readBismark method
totalReads-method       totalReads method
writeBED-method         writeBED method
