# Generated by roxygen2: do not edit by hand

exportClasses(BSDMCs)
exportClasses(BSData)
exportMethods("methLevels<-")
exportMethods("methReads<-")
exportMethods("methStates<-")
exportMethods("methVars<-")
exportMethods("totalReads<-")
exportMethods(cBSDMCs)
exportMethods(cBSData)
exportMethods(combine)
exportMethods(findDMCs)
exportMethods(manhattanDMCs)
exportMethods(methHMEM)
exportMethods(methHMMCMC)
exportMethods(methLevels)
exportMethods(methReads)
exportMethods(methStates)
exportMethods(methVars)
exportMethods(qqDMCs)
exportMethods(readBismark)
exportMethods(totalReads)
exportMethods(writeBED)
import(BiocParallel)
import(GenomicRanges)
import(IRanges)
import(S4Vectors)
import(SummarizedExperiment)
import(fdrtool)
import(grDevices)
import(graphics)
import(methods)
import(multcomp)
import(rtracklayer)
importFrom(calibrate,textxy)
importFrom(stats,as.formula)
importFrom(stats,dbinom)
importFrom(stats,lm)
importFrom(stats,pbeta)
importFrom(stats,pf)
importFrom(stats,ppoints)
importFrom(stats,qbeta)
importFrom(stats,runif)
importFrom(utils,combn)
