R: ITALICS

# ITALICS

## Documentation for package ‘ITALICS’ version 2.72.0

- DESCRIPTION file
- User guides, package vignettes and other documentation

## Help Pages

addInfo | add info to quartet annotation
analyseCGH | GLAD analysis
fromQuartetToSnp | Compute the copy number of each SNP from its quartets intensities
fromSnpToQuartet | Function to get from snp to quartet
getConfDat | Elimination of badly predicted probes
getCorrection | Correction
getEffet | Effet
getModel | Regression Model
getQuartet | Function to retrieve the information of each quartet
getResidu | Correction
getSnpInfo | Function to retrieve the chromosome and the position of each SNP on a given Affymetrix SNP array
ITALICS | Affymetrix SNP chip normalization
Italics | Affymetrix SNP chip normalization
italics | Affymetrix SNP chip normalization
readQuartetCopyNb | Read PM probes of selected quartets and compute the quartet intensity
trainITALICS | ITALICS training
trainItalics | ITALICS training
trainitalics | ITALICS training