Package: TCseq
Type: Package
Title: Time course sequencing data analysis
Version: 1.36.0
Author: Mengjun Wu <minervajunjun@gmail.com>, Lei Gu
        <leigu@broadinstitute.org>
Maintainer: Mengjun Wu <minervajunjun@gmail.com>
Description: Quantitative and differential analysis of epigenomic and
        transcriptomic time course sequencing data, clustering analysis
        and visualization of the temporal patterns of time course data.
Depends: R (>= 3.4)
License: GPL (>= 2)
LazyData: TRUE
Imports: edgeR, BiocGenerics, reshape2, GenomicRanges, IRanges,
        SummarizedExperiment, GenomicAlignments, Rsamtools, e1071,
        cluster, ggplot2, grid, grDevices, stats, utils, methods,
        locfit
Suggests: testthat
biocViews: Epigenetics, TimeCourse, Sequencing, ChIPSeq, RNASeq,
        DifferentialExpression, Clustering, Visualization
RoxygenNote: 7.2.3
Config/pak/sysreqs: libbz2-dev libicu-dev liblzma-dev xz-utils
        zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2026-04-28 12:44:54 UTC
RemoteUrl: https://github.com/bioc/TCseq
RemoteRef: RELEASE_3_23
RemoteSha: 718c01a2d2f0abe06a269b72356fd2d08bf78303
NeedsCompilation: no
Packaged: 2026-05-01 09:41:57 UTC; root
Built: R 4.6.0; ; 2026-05-01 09:58:59 UTC; unix
