maaslin_check_arguments
                        Check parameter arguments to ensure a
                        successful MaAsLin 3 run.
maaslin_check_formula   Check a MaAsLin 3 formula to ensure a proper
                        MaAsLin 3 run.
maaslin_compute_formula
                        Compute a formula for a MaAsLin 3 run based on
                        the specified effects.
maaslin_contrast_test   Perform a contrast from a fit MaAsLin 3 model.
maaslin_filter          Filter abundance data before MaAsLin 3 model
                        fitting.
maaslin_fit             Fit MaAsLin 3 models.
maaslin_log_arguments   Log MaAsLin 3 parameters.
maaslin_normalize       Normalize abundance data for MaAsLin 3 model
                        fitting.
maaslin_plot_results    Plot the results from a MaAsLin 3 run.
maaslin_plot_results_from_output
                        Plot the results from a MaAsLin 3 run.
maaslin_process_metadata
                        Process metadata before MaAsLin 3 model
                        fitting.
maaslin_read_data       Read in the abundance data and metadata.
maaslin_reorder_data    Reorder the abundance data and metadata.
maaslin_transform       Transform abundance data for MaAsLin 3
                        modeling.
maaslin_write_results   Write the results from a MaAsLin 3 run.
maaslin_write_results_lefse_format
                        Write the results from a MaAsLin 3 run in LEfSe
                        format.
maaslin3                MaAsLin 3: A multivariable statistical
                        framework for finding abundance and prevalence
                        associations between metadata and
                        high-dimensional microbial multi-omics data.
preprocess_dna_mtx      Pre-process the DNA covariates for
                        metatranscriptomics
preprocess_taxa_mtx     Pre-process the taxa covariates for
                        metatranscriptomics
