# Generated by roxygen2: do not edit by hand

export(basetheme)
export(clusKNN)
export(contourPlot)
export(downsampleByVar)
export(importData)
export(markerEnrichment)
export(markerExpression)
export(markerExpressionPerCluster)
export(metadataPlot)
export(performUMAP)
export(plotClusters)
export(plotSignatures)
export(processFCS)
import(SingleCellExperiment)
import(ggplot2)
import(ggrepel)
importFrom(MASS,rnegbin)
importFrom(RColorBrewer,brewer.pal)
importFrom(S4Vectors,"metadata<-")
importFrom(S4Vectors,metadata)
importFrom(Seurat,FindClusters)
importFrom(Seurat,FindNeighbors)
importFrom(corrplot,corrplot)
importFrom(flowCore,exprs)
importFrom(flowCore,read.FCS)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_bw)
importFrom(grDevices,colorRampPalette)
importFrom(graphics,legend)
importFrom(matrixStats,rowVars)
importFrom(methods,is)
importFrom(reshape2,melt)
importFrom(scales,rescale)
importFrom(stats,aggregate)
importFrom(stats,median)
importFrom(stats,quantile)
importFrom(stats,sd)
importFrom(umap,umap)
importFrom(utils,head)
