R: ChIPXpress: enhanced transcription factor target gene identification from ChIP-seq and ChIP-chip data using publicly available gene expression profiles

# ChIPXpress: enhanced transcription factor target gene identification from ChIP-seq and ChIP-chip data using publicly available gene expression profiles

## Documentation for package ‘ChIPXpress’ version 1.56.0

- DESCRIPTION file
- User guides, package vignettes and other documentation

## Help Pages

ChIPXpress-package | ChIPXpress ranks TF target genes given predicted TF targets from ChIP-chip and ChIP-seq data using publicly available gene expression data
buildDatabase | Builds a new database of gene expression profiles from a specified platform or sample files in NCBI GEO.
ChIPXpress | ChIPXpress Ranking
cleanDatabase | Cleans the annotated output from buildDatabase to the required format for ChIPXpress analyses
Oct4ESC_ChIPgenes | Predicted Oct4 bound genes in embryonic stem cells (ESC) obtained from analyzing ChIP-seq data