# Generated by roxygen2: do not edit by hand

export(SingleCellAlleleExperiment)
export(read_allele_counts)
export(scae_subset)
exportClasses(SingleCellAlleleExperiment)
exportMethods("rowData<-")
exportMethods(show)
importFrom(BiocParallel,SerialParam)
importFrom(BiocParallel,bplapply)
importFrom(DelayedArray,DelayedArray)
importFrom(Matrix,colSums)
importFrom(Matrix,readMM)
importFrom(Matrix,t)
importFrom(S4Vectors,DataFrame)
importFrom(S4Vectors,ROWNAMES)
importFrom(S4Vectors,coolcat)
importFrom(S4Vectors,metadata)
importFrom(S4Vectors,setValidity2)
importFrom(SingleCellExperiment,"counts<-")
importFrom(SingleCellExperiment,"logcounts<-")
importFrom(SingleCellExperiment,SingleCellExperiment)
importFrom(SingleCellExperiment,colData)
importFrom(SingleCellExperiment,counts)
importFrom(SingleCellExperiment,logcounts)
importFrom(SingleCellExperiment,rbind)
importFrom(SingleCellExperiment,rowData)
importFrom(SingleCellExperiment,sizeFactors)
importFrom(SummarizedExperiment,"assays<-")
importFrom(SummarizedExperiment,"colData<-")
importFrom(SummarizedExperiment,"metadata<-")
importFrom(SummarizedExperiment,"rowData<-")
importFrom(SummarizedExperiment,assays)
importFrom(methods,as)
importFrom(methods,callNextMethod)
importFrom(methods,is)
importFrom(methods,new)
importFrom(methods,validObject)
importFrom(stats,complete.cases)
importFrom(utils,read.csv)
importFrom(utils,read.delim)
importMethodsFrom(SingleCellExperiment,show)
