# Generated by roxygen2: do not edit by hand

export("peakAmpMatrix<-")
export("peakPosMatrix<-")
export("primarySeq<-")
export("primarySeqID<-")
export("secondarySeq<-")
export("secondarySeqID<-")
export("traceMatrix<-")
export(PolyPeakParser)
export(chromatogram)
export(makeBaseCalls)
export(peakAmpMatrix)
export(peakPosMatrix)
export(primarySeq)
export(primarySeqID)
export(read.abif)
export(read.scf)
export(readsangerseq)
export(sangerseq)
export(secondarySeq)
export(secondarySeqID)
export(setAllelePhase)
export(traceMatrix)
exportClasses(abif)
exportClasses(sangerseq)
exportClasses(scf)
import(methods)
import(shiny)
importFrom(Biostrings,DNAString)
importFrom(Biostrings,DNA_ALPHABET)
importFrom(Biostrings,IUPAC_CODE_MAP)
importFrom(Biostrings,mergeIUPACLetters)
importFrom(Biostrings,reverseComplement)
importFrom(grDevices,dev.off)
importFrom(grDevices,pdf)
importFrom(graphics,axis)
importFrom(graphics,lines)
importFrom(graphics,mtext)
importFrom(graphics,par)
importFrom(graphics,rect)
importFrom(pwalign,pairwiseAlignment)
importFrom(pwalign,score)
importFrom(stats,IQR)
importFrom(stats,quantile)
importFrom(stringr,str_replace)
