analysisPipeline	analysisPipeline
analysisPipeline,ExpressionSet,geneSignature-method	geneSignature-class
BrCa443	BrCa443
ensembleAdjustable	ensembleAdjustable
ensembleAdjustable,ExpressionSet,geneSignature-method	geneSignature-class
ensembleAdjustable,matrix,geneSignature-method	geneSignature-class
geneSignature-class	geneSignature-class
getDirect	setGeneSignature
getDirect,geneSignature-method	geneSignature-class
getGenes	setGeneSignature
getGenes,geneSignature-method	geneSignature-class
getGenes,solnSpace-method	geneSignature-class
getNGenes	setGeneSignature
getNGenes,geneSignature-method	geneSignature-class
getThresholds	setGeneSignature
getThresholds,geneSignature-method	geneSignature-class
getThresholds,solnSpace-method	geneSignature-class
setDirect	setGeneSignature
setDirect,geneSignature,numeric-method	geneSignature-class
setGenes	setGeneSignature
setGenes,geneSignature-method	geneSignature-class
setGenes,solnSpace-method	geneSignature-class
setGeneSignature	setGeneSignature
setGeneSignature,geneSignature-method	geneSignature-class
setThresholds	setGeneSignature
setThresholds,geneSignature-method	geneSignature-class
setThresholds,solnSpace-method	geneSignature-class
sigsquared	sigsquared
