R: Gene signature generation for functionally validated signaling pathways

# Gene signature generation for functionally validated signaling pathways

## Documentation for package ‘sigsquared’ version 1.44.0

- DESCRIPTION file
- User guides, package vignettes and other documentation

## Help Pages

analysisPipeline | Training of thresholds
analysisPipeline-method | Class '"geneSignature"'
BrCa443 | Breast Cancer 443 Data Set
ensembleAdjustable | Application of geneSignature object
ensembleAdjustable-method | Class '"geneSignature"'
geneSignature-class | Class '"geneSignature"'
getDirect | geneSignature functions
getDirect-method | Class '"geneSignature"'
getGenes | geneSignature functions
getGenes-method | Class '"geneSignature"'
getNGenes | geneSignature functions
getNGenes-method | Class '"geneSignature"'
getThresholds | geneSignature functions
getThresholds-method | Class '"geneSignature"'
setDirect | geneSignature functions
setDirect-method | Class '"geneSignature"'
setGenes | geneSignature functions
setGenes-method | Class '"geneSignature"'
setGeneSignature | geneSignature functions
setGeneSignature-method | Class '"geneSignature"'
setThresholds | geneSignature functions
setThresholds-method | Class '"geneSignature"'
sigsquared | The sigsquared package