Package: ASpli
Type: Package
Title: Analysis of Alternative Splicing Using RNA-Seq
Version: 2.22.0
Date: 2024-03-22
Author: Estefania Mancini, Andres Rabinovich, Javier Iserte, Marcelo
        Yanovsky and Ariel Chernomoretz
License: GPL
biocViews: ImmunoOncology, GeneExpression, Transcription,
        AlternativeSplicing, Coverage, DifferentialExpression,
        DifferentialSplicing, TimeCourse, RNASeq, GenomeAnnotation,
        Sequencing, Alignment
Depends: methods, grDevices, stats, utils, parallel, edgeR, limma,
        AnnotationDbi
Imports: GenomicRanges, GenomicFeatures, BiocGenerics, IRanges,
        GenomicAlignments, Gviz, S4Vectors, Rsamtools, BiocStyle,
        igraph, htmltools, data.table, UpSetR, tidyr, DT, MASS, grid,
        graphics, pbmcapply, txdbmaker
Description: Integrative pipeline for the analysis of alternative
        splicing using RNAseq.
Suggests:
Maintainer: Ariel Chernomoretz <algo107@gmail.com>
Config/pak/sysreqs: cmake libglpk-dev make libbz2-dev libicu-dev
        libjpeg-dev liblzma-dev libpng-dev libuv1-dev libxml2-dev
        libssl-dev xz-utils zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2026-04-28 12:43:57 UTC
RemoteUrl: https://github.com/bioc/ASpli
RemoteRef: RELEASE_3_23
RemoteSha: a8792c456ba650f779e873825e28bf236da17d07
NeedsCompilation: no
Packaged: 2026-04-29 18:11:48 UTC; root
Built: R 4.6.0; ; 2026-04-29 18:31:28 UTC; windows
