Package: CopyNumberPlots
Type: Package
Title: Create Copy-Number Plots using karyoploteR functionality
Version: 1.28.0
Author: Bernat Gel <bgel@igtp.cat> and Miriam Magallon
        <mmagallon@igtp.cat>
Maintainer: Bernat Gel <bgel@igtp.cat>
Description: CopyNumberPlots have a set of functions extending
        karyoploteRs functionality to create beautiful, customizable
        and flexible plots of copy-number related data.
Depends: R (>= 3.6), karyoploteR
Imports: regioneR, IRanges, Rsamtools, SummarizedExperiment,
        VariantAnnotation, methods, stats, GenomeInfoDb, GenomicRanges,
        cn.mops, rhdf5, utils
Suggests: BiocStyle, knitr, rmarkdown, panelcn.mops,
        BSgenome.Hsapiens.UCSC.hg19.masked, DNAcopy, testthat
License: Artistic-2.0
URL: https://github.com/bernatgel/CopyNumberPlots
BugReports: https://github.com/bernatgel/CopyNumberPlots/issues
Encoding: UTF-8
VignetteBuilder: knitr
biocViews: Visualization, CopyNumberVariation, Coverage, OneChannel,
        DataImport, Sequencing, DNASeq
RoxygenNote: 7.1.1
Config/pak/sysreqs: cmake make libbz2-dev libicu-dev liblzma-dev
        libpng-dev libuv1-dev libxml2-dev libssl-dev xz-utils
        zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2026-04-28 12:50:05 UTC
RemoteUrl: https://github.com/bioc/CopyNumberPlots
RemoteRef: RELEASE_3_23
RemoteSha: ccc507ce1e66a78a7dd7b69fba3fc3e189361803
NeedsCompilation: no
Packaged: 2026-04-29 20:46:25 UTC; root
Built: R 4.6.0; ; 2026-04-29 20:53:16 UTC; windows
