# Detection of Differentially Methylated Regions

## Documentation for package ‘DMRScan’ version 1.34.0

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

DMRScan_package-package | DMRScan: An R-package for identification of Differentially Metylated Regions
dmrscan | DMR Scan function
DMRScan.methylationData | DMRScan
DMRScan.phenotypes | DMRScan
DMRScan_package | DMRScan: An R-package for identification of Differentially Metylated Regions
estimateThreshold | EstimateWindowThresholds
estimateWindowThreshold | EstimateWindowThresholds
makeCpGgenes | Cluster
makeCpGregions | Cluster
manyWindowSizeScanner | Method Fixed window size scan for a sequence of window sizes
manyWindowSizeScanner-method | Method Fixed window size scan for a sequence of window sizes
oneWindowSizeScanner | Method Fixed window size scan for one window size
oneWindowSizeScanner-method | Method Fixed window size scan for one window size
Rt | Method Fixed window size scan for one window size
Rt-method | Method Fixed window size scan for one window size
St | Method Fixed window size scan for a sequence of window sizes