G4HunterDetect          Detect G4 Sequences Using the G4Hunter
                        Algorithm
G4HunterScore           Calculate the G4Hunter Score for a Given
                        Sequence
G4VarImpact             Evaluate the Impact of Variants (SNVs, Indels,
                        MNVs) on G4 Sequences
SNVImpactG4             Evaluate the Impact of SNVs on G4 Sequences
checkSNV                Check the validity of SNVs
exportG4                Export Predicted G4s to a File
exportMutG4             Export G4s and Associated Variant Information
                        to File
filterSNVImpact         Filter SNV Impact GRanges Object Based on
                        User-Defined Thresholds
filterVarImpact         Filter Variant Impact G4 Object Based on
                        User-Defined Thresholds
loadSequence            Load Genome Sequences
loadVariant             Load Small Variant Data from VCF or MAF Files
plotG4Info              Plot Basic Statistics of G4s Detected by the
                        G4HunterDetect Function
plotImpactSeq           Visualize the variants in G4 sequence
plotImpactedG4          Sequence Logo of the G4 Sequence and Its Mutant
                        Counterpart
plotSNVImpact           Plot the Impact of SNVs on G4Hunter Scores
plotVarImpact           Plot the Impact of Variants on G4 Formation
snp_gr                  Single Nucleotide Polymorphisms GRanges Object
snv_gr                  Single Nucleotide Variant GRanges Object
